RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 NME1P15531 152 aaKnown RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 PPP3CBP16298 524 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 HPCAP84074 193 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 HSF2Q03933 536 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 MMRN1Q13201 1228 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ZNF174Q15697 407 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 BAK1Q16611 211 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ACER2Q5QJU3 275 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 PLEKHS1Q5SXH7 462 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 DMRTC2Q8IXT2 367 aaPredicted RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 PDIK1LQ8N165 341 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 SVOPQ8N4V2 548 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 OR7G3Q8NG95 312 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 SLC6A18Q96N87 628 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 TMEM168Q9H0V1 697 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 CNOT10Q9H9A5 744 aaKnown RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 ELOVL2Q9NXB9 296 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 KCNK4Q9NYG8 393 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 HEY2Q9UBP5 337 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 MAN1B1Q9UKM7 699 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 PCDHA12Q9UN75 941 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 MTO1Q9Y2Z2 717 aaKnown RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 FAM170BA6NMN3 283 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 TCP11X1B4DZS4 312 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 IFNL4K9M1U5 179 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 M0QZ92 97 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 TSPAN4O14817 238 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 SYF2O95926 243 aaKnown RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 CHRM2P08172 466 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 CD6P30203 668 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 GALK1P51570 392 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 PTENP60484 403 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 CSNK2A1P68400 391 aaPredicted RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 GRM7Q14831 915 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ZXDCQ2QGD7 858 aaPredicted RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 ARHGAP40Q5TG30 622 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 RAET1LQ5VY80 246 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 BRAT1Q6PJG6 821 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 LYSMD3Q7Z3D4 306 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 HORMAD1Q86X24 394 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 MMAAQ8IVH4 418 aaKnown RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 CYB561A3Q8NBI2 242 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 CSNK2A3Q8NEV1 391 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 MAFAQ8NHW3 353 aaPredicted RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 STK35Q8TDR2 534 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 MCUR1Q96AQ8 359 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ZSWIM3Q96MP5 696 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 SPATA6Q9NWH7 488 aaPredicted RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 CDH9Q9ULB4 789 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 WDR87Q6ZQQ6 2873 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ARHGAP42A6NI28 874 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 C4orf47A7E2U8 309 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 TULP3O75386 442 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 MT-ND2P03891 347 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 CCL2P13500 99 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 PLS3P13797 630 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ELNP15502 786 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 SLC6A6P31641 620 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 SP2Q02086 613 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 EXT1Q16394 746 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 TRIM16LQ309B1 348 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 LINC01559Q495D7 138 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ACTBL2Q562R1 376 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 CMPK2Q5EBM0 449 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 CELF3Q5SZQ8 465 aaKnown RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 TECPR1Q7Z6L1 1165 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ACBD4Q8NC06 268 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 DNAJB3Q8WWF6 145 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 EXOSC8Q96B26 276 aaKnown RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 LRFN5Q96NI6 719 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ROPN1BQ9BZX4 212 aaPredicted RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 USP29Q9HBJ7 922 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 MMP25Q9NPA2 562 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 NOP53Q9NZM5 478 aaKnown RBP8.72□□□□□ -1.01
UBR4-201ENST00000375218 NDUFAF4Q9P032 175 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 RWDD2AQ9UIY3 292 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 ZNF281Q9Y2X9 895 aa8.72□□□□□ -1.01
UBR4-201ENST00000375218 CLCA1A8K7I4 914 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 MGRN1O60291 552 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 SUN1O94901 812 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 ALX3O95076 343 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 NXPH2O95156 264 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 MSH3P20585 1137 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 FRKP42685 505 aaPredicted RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 MTNR1BP49286 362 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 MRPS9P82933 396 aaKnown RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 GHRHRQ02643 423 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 CHRNEQ04844 493 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 RABGAP1LQ5R372 815 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 BCL2L2Q92843 193 aaPredicted RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 BSCL2Q96G97 398 aaPredicted RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 PAGE5Q96GU1 130 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 ZNF160Q9HCG1 818 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 TLR9Q9NR96 1032 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 GDF2Q9UK05 429 aaPredicted RBP8.71□□□□□ -1.01
UBR4-201ENST00000375218 UTS2RQ9UKP6 389 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 PCDHA4Q9UN74 947 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 ZMYM2Q9UBW7 1377 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 SMIM23A6NLE4 172 aa8.71□□□□□ -1.01
UBR4-201ENST00000375218 F5H6K3 240 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms