RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 UGT2B11O75310 529 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SOX30O94993 753 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 CST1P01037 141 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC35G4P0C7Q5 338 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 MYCLP1P12525 358 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 LAMP2P13473 410 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 DRD2P14416 443 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 DRD1P21728 446 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 PTPN6P29350 595 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 RYKP34925 604 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 GRK3P35626 688 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 OPRD1P41143 372 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC19A1P41440 591 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 VIPR2P41587 438 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 GZMMP51124 257 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 CCR8P51685 355 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 DGKQP52824 942 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 CTSCP53634 463 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 GABARAPL2P60520 117 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 CXCR4P61073 352 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 TBPL1P62380 186 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 MRPS21P82921 87 aaKnown RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 CDK3Q00526 305 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 TEKQ02763 1124 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 RELAQ04206 551 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 GNA13Q14344 377 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 RBBP5Q15291 538 aaKnown RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 CST6Q15828 149 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 ZNF630Q2M218 657 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 C18orf21Q32NC0 220 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 FBXO43Q4G163 708 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SGO1Q5FBB7 561 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 FBXO48Q5FWF7 155 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 PRAMEF14Q5SWL7 426 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 PIP5KL1Q5T9C9 394 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 PRAMEF13Q5VWM6 474 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 BHLHB9Q6PI77 547 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 TTC33Q6PID6 262 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 VITQ6UXI7 678 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 TMIGD1Q6UXZ0 262 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 LINC00299Q6ZSB3 139 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 USP51Q70EK9 711 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 CCDC80Q76M96 950 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 EIF3MQ7L2H7 374 aaKnown RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 C17orf64Q86WR6 236 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 LRRC56Q8IYG6 542 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SAMD14Q8IZD0 417 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 GALNT15Q8N3T1 639 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 GALNT4Q8N4A0 578 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 C11orf65Q8NCR3 313 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 OR4K1Q8NGD4 311 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 OR10A6Q8NH74 314 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 HUS1BQ8NHY5 278 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.4□□□□□ -1.067e-13■□□□□ 10.5
SNRNP40-202ENST00000373720 FKBP10Q96AY3 582 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC22A18Q96BI1 424 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 MOAP1Q96BY2 351 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC47A1Q96FL8 570 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 MED8Q96G25 268 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SCARF2Q96GP6 870 aaPredicted RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 CNBD2Q96M20 576 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 GABRG3Q99928 467 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 BCL7BQ9BQE9 202 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 ATG10Q9H0Y0 220 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 WDR26Q9H7D7 661 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 SLC28A3Q9HAS3 691 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 FARSBQ9NSD9 589 aaKnown RBP8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 TAS2R7Q9NYW3 318 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 EHD3Q9NZN3 535 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 TMEM9Q9P0T7 183 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 LIMD1Q9UGP4 676 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 OAZ3Q9UMX2 235 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 NCKAP1Q9Y2A7 1128 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 PADI2Q9Y2J8 665 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 STON1Q9Y6Q2 735 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 COLEC10Q9Y6Z7 277 aa8.4□□□□□ -1.06
SNRNP40-202ENST00000373720 PIKFYVEQ9Y2I7 2098 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 GNG14A0A1W2PPG7 69 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 PIPSLA2A3N6 862 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 C7orf72A4D263 438 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 E7EQ34 232 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 TNFRSF10CO14798 259 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ADAMDEC1O15204 470 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 SPINT1O43278 529 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 PCDH7O60245 1069 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 NOBOXO60393 691 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 DFNA5O60443 496 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 MMP20O60882 483 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 GPR37L1O60883 481 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 CLEC3AO75596 197 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 CSPG5O95196 566 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 DNTTP04053 509 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ALPLP05186 524 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 TFAP2AP05549 437 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 CCDC159P0C7I6 412 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 THRBP10828 461 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ARSAP15289 507 aa8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 ZNF8P17098 575 aaPredicted RBP8.39□□□□□ -1.07
SNRNP40-202ENST00000373720 EN2P19622 333 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms