RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 FZD4Q9ULV1 537 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 GNG14A0A1W2PPG7 69 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 SERTM1A2A2V5 107 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 OTOL1A6NHN0 477 aaPredicted RBP22.97■■□□□ 1.27
CDK9-201ENST00000373264 PRRT4C9JH25 899 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 H0YIV9 168 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 ZBTB11O95625 1053 aaPredicted RBP22.97■■□□□ 1.27
CDK9-201ENST00000373264 CATP04040 527 aaKnown RBP22.97■■□□□ 1.27
CDK9-201ENST00000373264 CYP17A1P05093 508 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 MLLT10P55197 1068 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 TBPL1P62380 186 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 NFATC3Q12968 1075 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 STARD3Q14849 445 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 OR56A3Q8NH54 315 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 GLMNQ92990 594 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 PDP1Q9P0J1 537 aaPredicted RBP22.97■■□□□ 1.27
CDK9-201ENST00000373264 ZNF451Q9Y4E5 1061 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 DGKBQ9Y6T7 804 aa22.97■■□□□ 1.27
CDK9-201ENST00000373264 CISD3P0C7P0 127 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 SLC6A11P48066 632 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 DGKGP49619 791 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 HTRA4P83105 476 aaPredicted RBP22.96■■□□□ 1.27
CDK9-201ENST00000373264 CDK5R2Q13319 367 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 DMC1Q14565 340 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 SLCO4C1Q6ZQN7 724 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 HIPK1Q86Z02 1210 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 FAM9CQ8IZT9 166 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 OPN1SWP03999 348 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 SEMG1P04279 462 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 JUNBP17275 347 aaPredicted RBP22.96■■□□□ 1.27
CDK9-201ENST00000373264 IDSP22304 550 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 PRSS36Q5K4E3 855 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 COX20Q5RI15 118 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 LDLRAP1Q5SW96 308 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 CPTPQ5TA50 214 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 TRAPPC5Q8IUR0 188 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 NAGSQ8N159 534 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 ZNF740Q8NDX6 193 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 WARS2Q9UGM6 360 aaKnown RBP22.96■■□□□ 1.27
CDK9-201ENST00000373264 RAPGEFL1Q9UHV5 662 aa22.96■■□□□ 1.27
CDK9-201ENST00000373264 FAF1Q9UNN5 650 aaPredicted RBP22.96■■□□□ 1.27
CDK9-201ENST00000373264 H3BM21 787 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 PCDH7O60245 1069 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 UGDHO60701 494 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 C1orf105O95561 183 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 TGFB1P01137 390 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 FABP3P05413 133 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 IL1RNP18510 177 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 GSTM2P28161 218 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 KCNC3Q14003 757 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 CYP27C1Q4G0S4 372 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 ANGPTL8Q6UXH0 198 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 PIK3C3Q8NEB9 887 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 OR51B5Q9H339 312 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 FAM120CQ9NX05 1096 aaKnown RBP22.95■■□□□ 1.26
CDK9-201ENST00000373264 GALNT8Q9NY28 637 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 PLAGL1Q9UM63 463 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 PCDHB11Q9Y5F2 797 aa22.95■■□□□ 1.26
CDK9-201ENST00000373264 C1orf226A1L170 272 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 TMEM229AB2RXF0 380 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 GCM2O75603 506 aaPredicted RBP22.94■■□□□ 1.26
CDK9-201ENST00000373264 HTR1BP28222 390 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 TTKP33981 857 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 GSSP48637 474 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 AQP6Q13520 282 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 PRSS53Q2L4Q9 553 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 CRTC3Q6UUV7 619 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 MMP21Q8N119 569 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 CHTF18Q8WVB6 975 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 CIDECQ96AQ7 238 aaPredicted RBP22.94■■□□□ 1.26
CDK9-201ENST00000373264 TIFAQ96CG3 184 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 IL17FQ96PD4 163 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 TUBA1CQ9BQE3 449 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 GPATCH2Q9NW75 528 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 TBC1D14Q9P2M4 693 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 ERVK-18Q9QC07 812 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 ACSL6Q9UKU0 697 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 NPPBP16860 134 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 HOXA9P31269 272 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 HNF4AP41235 474 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 MAP2K4P45985 399 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 GRSF1Q12849 480 aaKnown RBP eCLIP22.94■■□□□ 1.26
CDK9-201ENST00000373264 TMED1Q13445 227 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 CAMK1Q14012 370 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 ZNF658BQ4V348 819 aaPredicted RBP22.94■■□□□ 1.26
CDK9-201ENST00000373264 ARMCX6Q7L4S7 300 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 B3GNT8Q7Z7M8 397 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 SYNPOQ8N3V7 929 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 WDR48Q8TAF3 677 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 VPS35Q96QK1 796 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 FUNDC2Q9BWH2 189 aa22.94■■□□□ 1.26
CDK9-201ENST00000373264 SAMHD1Q9Y3Z3 626 aaKnown RBP22.94■■□□□ 1.26
CDK9-201ENST00000373264 TRIM64BA6NI03 449 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 SLC16A6O15403 523 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 MMP20O60882 483 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 CCNA2P20248 432 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 GP2P55259 537 aaKnown RBP22.93■■□□□ 1.26
CDK9-201ENST00000373264 FOXD4Q12950 439 aaPredicted RBP22.93■■□□□ 1.26
CDK9-201ENST00000373264 Q6ZPB1 254 aaPredicted RBP22.93■■□□□ 1.26
CDK9-201ENST00000373264 ARRDC3Q96B67 414 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms