RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 KDELR3O43731 214 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 ITIH1P19827 911 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 MS4A13Q5J8X5 152 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 SLC35F4A4IF30 521 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 COQ9O75208 318 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 GSTM3P21266 225 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 PTPRCAPQ14761 206 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 MSANTD1Q6ZTZ1 278 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 SLC35F5Q8WV83 523 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 MND1Q9BWT6 205 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 SLC22A1O15245 554 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 PMM2O15305 246 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 SOX14O95416 240 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 TYRP14679 529 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 ZNF12P17014 697 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 ARHGAP40Q5TG30 622 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 CNKSR3Q6P9H4 555 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 SUSD1Q6UWL2 747 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 ZNF641Q96N77 438 aaPredicted RBP21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 MAU2Q9Y6X3 613 aa21.52■■□□□ 1.04
TM9SF3-201ENST00000371142 FCER2P06734 321 aa21.52■■□□□ 1.03
TM9SF3-201ENST00000371142 SCNN1AP37088 669 aa21.52■■□□□ 1.03
TM9SF3-201ENST00000371142 GSK3BP49841 420 aa21.52■■□□□ 1.03
TM9SF3-201ENST00000371142 KLHL6Q8WZ60 621 aa21.52■■□□□ 1.03
TM9SF3-201ENST00000371142 SMPDL3AQ92484 453 aa21.52■■□□□ 1.03
TM9SF3-201ENST00000371142 METTL8Q9H825 291 aaKnown RBP21.52■■□□□ 1.03
TM9SF3-201ENST00000371142 MAN2A2P49641 1150 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 LMX1AQ8TE12 382 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 PYURFQ96I23 114 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 TUBGCP5Q96RT8 1024 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 PKP2Q99959 881 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 ITPAQ9BY32 194 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 BCO2Q9BYV7 579 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 SLC29A3Q9BZD2 475 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 MED11Q9P086 117 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 AFDNP55196 1824 aaKnown RBP21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 C2orf92A0A1B0GVN3 265 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 L7N2F9 121 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 VAMP2P63027 116 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 DNASE1L3Q13609 305 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 GLIS1Q8NBF1 620 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 C9orf43Q8TAL5 461 aaPredicted RBP21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 NCSTNQ92542 709 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 HSH2DQ96JZ2 352 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 INSL6Q9Y581 213 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 A0A0U1RQF3 1178 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 M0QX08 132 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 C6orf47O95873 294 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 MATN1P21941 496 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 PIK3CBP42338 1070 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 PTCHD3Q3KNS1 767 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 PAMR1Q6UXH9 720 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 GRASPQ7Z6J2 395 aaPredicted RBP21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 JAGN1Q8N5M9 183 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 TRPV4Q9HBA0 871 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 SDHAF3Q9NRP4 125 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 TBX10O75333 385 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 GKP32189 559 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 GRK5P34947 590 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 KLHDC10Q6PID8 442 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 ADGRD2Q7Z7M1 963 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 NATD1Q8N6N6 113 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 OR4K17Q8NGC6 315 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 GNG8Q9UK08 70 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 CHRNA1P02708 482 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 HLA-EP13747 358 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 FOXRED2Q8IWF2 684 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 TOMM5Q8N4H5 51 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 SLC5A11Q8WWX8 675 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 NXPE2Q96DL1 559 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 TDP1Q9NUW8 608 aa21.51■■□□□ 1.03
TM9SF3-201ENST00000371142 HYKKA2RU49 373 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 TSPAN4O14817 238 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 TRAPPC6AO75865 159 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 PYHIN1Q6K0P9 492 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 CHRDL2Q6WN34 429 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 DCSTAMPQ9H295 470 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 RHCGQ9UBD6 479 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 MYO5BQ9ULV0 1848 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 AKAP8O43823 692 aaKnown RBP21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 NPLOC4Q8TAT6 608 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 PHOSPHO1Q8TCT1 267 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 CCDC120Q96HB5 630 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 BTBD1Q9H0C5 482 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 CYTH4Q9UIA0 394 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 PCDHGB1Q9Y5G3 927 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 LOC100509620A0A075B734 347 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 ZNF670-ZNF695F2Z2N8 137 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 RCBTB2O95199 551 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 ATF6P18850 670 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 KCNJ5P48544 419 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 SEMA3AQ14563 771 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 TPRG1Q6ZUI0 275 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 PHTF2Q8N3S3 785 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 Q9N2J8 555 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 BLOC1S5-TXNDC5H3BN57 136 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 IFI30P13284 250 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 GRM2Q14416 872 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 NADK2Q4G0N4 442 aa21.5■■□□□ 1.03
TM9SF3-201ENST00000371142 SLC39A4Q6P5W5 647 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms