RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 STX5Q13190 355 aa22.9■■□□□ 1.26
SNX3-203ENST00000368979 PTGR1Q14914 329 aa22.9■■□□□ 1.26
SNX3-203ENST00000368979 DNAL1Q4LDG9 190 aa22.9■■□□□ 1.26
SNX3-203ENST00000368979 SPIN4Q56A73 249 aa22.9■■□□□ 1.26
SNX3-203ENST00000368979 ACSM2BQ68CK6 577 aa22.9■■□□□ 1.26
SNX3-203ENST00000368979 NOXRED1Q6NXP6 359 aa22.9■■□□□ 1.26
SNX3-203ENST00000368979 GPR156Q8NFN8 814 aa22.9■■□□□ 1.26
SNX3-203ENST00000368979 CADM1Q9BY67 442 aaKnown RBP22.9■■□□□ 1.26
SNX3-203ENST00000368979 SIRT5Q9NXA8 310 aa22.9■■□□□ 1.26
SNX3-203ENST00000368979 RUVBL1Q9Y265 456 aaKnown RBP22.9■■□□□ 1.26
SNX3-203ENST00000368979 FAM234BA2RU67 622 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 GSAPA4D1B5 854 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 OR5K3A6NET4 321 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 C9JVG2 144 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 HAT1O14929 419 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 OR1F1O43749 312 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 LCMT2O60294 686 aaKnown RBP22.89■■□□□ 1.26
SNX3-203ENST00000368979 FKBP9O95302 570 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 PCSK2P16519 638 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 ITGAXP20702 1163 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 CAPN3P20807 821 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 HOXD12P35452 270 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 GRK3P35626 688 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 GRIA3P42263 894 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 ARRB1P49407 418 aaPredicted RBP22.89■■□□□ 1.26
SNX3-203ENST00000368979 BNIP3Q12983 259 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 REP15Q6BDI9 236 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 PAQR7Q86WK9 346 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 OOSP2Q86WS3 158 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 PLD3Q8IV08 490 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 SLC25A45Q8N413 288 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 UTP4Q969X6 686 aaKnown RBP22.89■■□□□ 1.26
SNX3-203ENST00000368979 MS4A8Q9BY19 250 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 OR51B5Q9H339 312 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 EFCAB1Q9HAE3 211 aa22.89■■□□□ 1.26
SNX3-203ENST00000368979 LILRA5A6NI73 299 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 BBIP1A8MTZ0 92 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 AIM2O14862 343 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 GSC2O15499 205 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 TNFSF14O43557 240 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 SH3BGRLO75368 114 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 GIMD1P0DJR0 217 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 PTX3P26022 381 aaPredicted RBP22.88■■□□□ 1.25
SNX3-203ENST00000368979 GSTM2P28161 218 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 BCL6P41182 706 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 NUDT2P50583 147 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 POLR2JP52435 117 aaKnown RBP22.88■■□□□ 1.25
SNX3-203ENST00000368979 RAE1P78406 368 aaKnown RBP22.88■■□□□ 1.25
SNX3-203ENST00000368979 SLC25A3Q00325 362 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 SIM2Q14190 667 aaPredicted RBP22.88■■□□□ 1.25
SNX3-203ENST00000368979 SLC5A12Q1EHB4 618 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 C14orf28Q4W4Y0 310 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 C6orf132Q5T0Z8 1188 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 FAM9CQ8IZT9 166 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 C1orf52Q8N6N3 182 aaKnown RBP22.88■■□□□ 1.25
SNX3-203ENST00000368979 TTLQ8NG68 377 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 NPAS2Q99743 824 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 PRM3Q9NNZ6 103 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 HRASLS2Q9NWW9 162 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 ANKMY1Q9P2S6 941 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 KLHL20Q9Y2M5 609 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 KLK4Q9Y5K2 254 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 GON4LQ3T8J9 2241 aa22.88■■□□□ 1.25
SNX3-203ENST00000368979 TNFRSF10AO00220 468 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 KRT16P08779 473 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 TACR1P25103 407 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 KCNK10P57789 538 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 CYP4F2P78329 520 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 ANGPT1Q15389 498 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 GALNT18Q6P9A2 607 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 SPESP1Q6UW49 350 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 TRIM73Q86UV7 250 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 METTL4Q8N3J2 472 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 KYQ8NBH2 561 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 CREB3L4Q8TEY5 395 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 RSC1A1Q92681 617 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 SPDL1Q96EA4 605 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 EBPLQ9BY08 206 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.87■■□□□ 1.25
SNX3-203ENST00000368979 DPY30Q9C005 99 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 BAIAP2L1Q9UHR4 511 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 KMT2EQ8IZD2 1858 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 OR2A25A4D2G3 310 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 CLEC3AO75596 197 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 MYO1DO94832 1006 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 SEMA3DO95025 777 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 HOXB3P14651 431 aaPredicted RBP22.87■■□□□ 1.25
SNX3-203ENST00000368979 EPHA8P29322 1005 aaPredicted RBP22.87■■□□□ 1.25
SNX3-203ENST00000368979 DPP6P42658 865 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 CLDN8P56748 225 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 VPS26BQ4G0F5 336 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 COQ5Q5HYK3 327 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 TBC1D19Q8N5T2 526 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 GLB1L3Q8NCI6 653 aaPredicted RBP22.87■■□□□ 1.25
SNX3-203ENST00000368979 RAB3IPQ96QF0 476 aaPredicted RBP22.87■■□□□ 1.25
SNX3-203ENST00000368979 PCDHGA2Q9Y5H1 932 aa22.87■■□□□ 1.25
SNX3-203ENST00000368979 A0A1B0GTQ1 180 aa22.86■■□□□ 1.25
SNX3-203ENST00000368979 DYTNA2CJ06 578 aa22.86■■□□□ 1.25
SNX3-203ENST00000368979 MAGP20916 626 aa22.86■■□□□ 1.25
SNX3-203ENST00000368979 TIA1P31483 386 aaKnown RBP eCLIP22.86■■□□□ 1.253e-15■■■■■ 33.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms