RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 HTRA3P83110 453 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 CATSPEREQ5SY80 951 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 TMPRSS11BQ86T26 416 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 OR4K1Q8NGD4 311 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 GLYATL1Q969I3 302 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 C11orf24Q96F05 449 aaPredicted RBP17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 ZSWIM3Q96MP5 696 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 TCF25Q9BQ70 676 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 ASPSCR1Q9BZE9 553 aa17.46■□□□□ 0.39
UBQLN4-201ENST00000368309 MGAT4DA6NG13 374 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 SCAMP2O15127 329 aaKnown RBP17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 ATG13O75143 517 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 MOSPD3O75425 235 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 CCDC159P0C7I6 412 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 ACPPP15309 386 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 NNMTP40261 264 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 PSMD7P51665 324 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 METAP1P53582 386 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 GAB1Q13480 694 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 DGCR6Q14129 220 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 Q6ZNX1 250 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 CBLL1Q75N03 491 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 EIF3MQ7L2H7 374 aaKnown RBP17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 RASGRP3Q8IV61 690 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 NAGSQ8N159 534 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 FAR1Q8WVX9 515 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 MRGPRX3Q96LB0 322 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 RAPGEFL1Q9UHV5 662 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF99A8MXY4 864 aaPredicted RBP17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 H0YIV9 168 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 PRMT3O60678 531 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 FPR1P21462 350 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 HOXA9P31269 272 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 CRYBA2P53672 197 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 PRMT2P55345 433 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 KCNC3Q14003 757 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 GRHL2Q6ISB3 625 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 THUMPD1Q9NXG2 353 aaKnown RBP17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 CLPXO76031 633 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 ELFN1P0C7U0 828 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 ALDH4A1P30038 563 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 HNF4AP41235 474 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 FOXD4Q12950 439 aaPredicted RBP17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 IL18R1Q13478 541 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 IER5LQ5T953 404 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 PLPP4Q5VZY2 271 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 SYTL1Q8IYJ3 562 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 ATL1Q8WXF7 558 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 ERLEC1Q96DZ1 483 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 CCM2Q9BSQ5 444 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 REEP1Q9H902 201 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 KRT84Q9NSB2 600 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 IL36AQ9UHA7 158 aa17.45■□□□□ 0.38
UBQLN4-201ENST00000368309 TOR1BO14657 336 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 NPC1O15118 1278 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 ITIH1P19827 911 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 TNFRSF1BP20333 461 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 CD6P30203 668 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 VEGFBP49765 207 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 DCDC1P59894 354 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 CREMQ03060 361 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 ERICH5Q6P6B1 374 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 TECPR1Q7Z6L1 1165 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 RNF217Q8TC41 542 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 RUBCNLQ9H714 662 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF451Q9Y4E5 1061 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 DENND4CQ5VZ89 1909 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 CXorf51AA0A1B0GTR3 108 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 SLC5A10A0PJK1 596 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 PCDH7O60245 1069 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 OPN1SWP03999 348 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 SEMG1P04279 462 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 IDSP22304 550 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 MEF2AQ02078 507 aaPredicted RBP17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 CFAP206Q8IYR0 622 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 SYNPOQ8N3V7 929 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 SMYD1Q8NB12 490 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 SETD9Q8NE22 299 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 FBLIM1Q8WUP2 373 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 TIFAQ96CG3 184 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 MAGEB10Q96LZ2 347 aaPredicted RBP17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 GULP1Q9UBP9 304 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 SH2B3Q9UQQ2 575 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 ZBBXA8MT70 800 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 KPNA3O00505 521 aaPredicted RBP17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 RHOP08100 348 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 CLTBP09497 229 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 CTF1Q16619 201 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF805Q5CZA5 627 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF697Q5TEC3 545 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 LIPIQ6XZB0 460 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF852Q6ZMS4 543 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 Q6ZPB1 254 aaPredicted RBP17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 ZNF540Q8NDQ6 660 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 VPS37AQ8NEZ2 397 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 RORBQ92753 470 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 ENPP5Q9UJA9 477 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 PCDHGA10Q9Y5H3 936 aa17.44■□□□□ 0.38
UBQLN4-201ENST00000368309 GMEB1Q9Y692 573 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms