RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 HUS1BQ8NHY5 278 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 ADAMTS16Q8TE57 1224 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 NEIL2Q969S2 332 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 RAD51AP1Q96B01 352 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 PYURFQ96I23 114 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 TBCDQ9BTW9 1192 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 DUSP26Q9BV47 211 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 NTN4Q9HB63 628 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 IFT80Q9P2H3 777 aaPredicted RBP13.52□□□□□ -0.25
USF1-202ENST00000368020 ATXN10Q9UBB4 475 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 COQ6Q9Y2Z9 468 aa13.52□□□□□ -0.25
USF1-202ENST00000368020 XIRP2A4UGR9 3374 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 COL4A3Q01955 1670 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 EYSQ5T1H1 3165 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 CLIC1O00299 241 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 MMP20O60882 483 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 POP7O75817 140 aaKnown RBP13.51□□□□□ -0.25
USF1-202ENST00000368020 LRATO95237 230 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 THRBP10828 461 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 DDX5P17844 614 aaKnown RBP13.51□□□□□ -0.25
USF1-202ENST00000368020 KELP23276 732 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 TEAD1P28347 426 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 P2RY2P41231 377 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 RXRGP48443 463 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 ADARB1P78563 741 aaKnown RBP13.51□□□□□ -0.25
USF1-202ENST00000368020 ZNF763Q0D2J5 394 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 DDX39BQ13838 428 aaKnown RBP13.51□□□□□ -0.25
USF1-202ENST00000368020 VEZF1Q14119 521 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 AGERQ15109 404 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 RBBP5Q15291 538 aaKnown RBP13.51□□□□□ -0.25
USF1-202ENST00000368020 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.51□□□□□ -0.25
USF1-202ENST00000368020 DOK6Q6PKX4 331 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 PDZD3Q86UT5 571 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 HIPK1Q86Z02 1210 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 DCUN1D3Q8IWE4 304 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 ZNF786Q8N393 782 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 SLC44A3Q8N4M1 653 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 ST13P5Q8NFI4 369 aaPredicted RBP13.51□□□□□ -0.25
USF1-202ENST00000368020 OR5K1Q8NHB7 308 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 NUDT8Q8WV74 236 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 SNX19Q92543 992 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 COX14Q96I36 57 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 INPP5KQ9BT40 448 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 EBPLQ9BY08 206 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 BHLHE41Q9C0J9 482 aaPredicted RBP13.51□□□□□ -0.25
USF1-202ENST00000368020 PCBD2Q9H0N5 130 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 PRM3Q9NNZ6 103 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 GULP1Q9UBP9 304 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 ZNF282Q9UDV7 671 aaPredicted RBP13.51□□□□□ -0.25
USF1-202ENST00000368020 C3orf18Q9UK00 162 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 ORC6Q9Y5N6 252 aa13.51□□□□□ -0.25
USF1-202ENST00000368020 UPK1AO00322 258 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 RNASET2O00584 256 aaKnown RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 PRKD3O94806 890 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 SERPINA1P01009 418 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 EPHX1P07099 455 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ABCB1P08183 1280 aaPredicted RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 NPPBP16860 134 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ACADLP28330 430 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 SERPINB1P30740 379 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 GJA4P35212 333 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 MAGEA2P43356 314 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ALDH3B2P48448 385 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 RPS6KA3P51812 740 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ARHGDIAP52565 204 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 GTDC1Q4AE62 458 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 SLC44A4Q53GD3 710 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 LCTLQ6UWM7 567 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ENPP6Q6UWR7 440 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 B3GNT6Q6ZMB0 384 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 RBM44Q6ZP01 1051 aaKnown RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 STK32CQ86UX6 486 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 AMZ2Q86W34 360 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ANKRD46Q86W74 232 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 MMAAQ8IVH4 418 aaKnown RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 PHACTR4Q8IZ21 702 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 KRT78Q8N1N4 520 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 LILRA3Q8N6C8 439 aaPredicted RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 C1orf52Q8N6N3 182 aaKnown RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 METTL25Q8N6Q8 603 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 SLC5A11Q8WWX8 675 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 DNASE1L2Q92874 299 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 COQ8BQ96D53 544 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 MTERF3Q96E29 417 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 EGLN2Q96KS0 407 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 PITHD1Q9GZP4 211 aaPredicted RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 RBM38Q9H0Z9 239 aaKnown RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 PRSS16Q9NQE7 514 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 AASDHPPTQ9NRN7 309 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 DDX18Q9NVP1 670 aaKnown RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 VPS4AQ9UN37 437 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 PCDHB11Q9Y5F2 797 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 GNG14A0A1W2PPG7 69 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 PIPSLA2A3N6 862 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 CCDC160A6NGH7 325 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 K7ESM1 405 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ZNF701M0R085 212 aaPredicted RBP13.5□□□□□ -0.25
USF1-202ENST00000368020 PCDH7O60245 1069 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 SCN2BO60939 215 aa13.5□□□□□ -0.25
USF1-202ENST00000368020 ADH1BP00325 375 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms