RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 PYCR2Q96C36 320 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 MRRFQ96E11 262 aaKnown RBP8.88□□□□□ -0.99
MRPL55-216ENST00000366744 ABHD17AQ96GS6 310 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 C10orf90Q96M02 699 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 OR2A5Q96R48 311 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 SOX17Q9H6I2 414 aaPredicted RBP8.88□□□□□ -0.99
MRPL55-216ENST00000366744 PELI2Q9HAT8 420 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 NMRAL1Q9HBL8 299 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 MKKSQ9NPJ1 570 aaPredicted RBP8.88□□□□□ -0.99
MRPL55-216ENST00000366744 SMYD2Q9NRG4 433 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 ZDHHC18Q9NUE0 388 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 CD274Q9NZQ7 290 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 CTSFQ9UBX1 484 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 MTO1Q9Y2Z2 717 aaKnown RBP8.88□□□□□ -0.99
MRPL55-216ENST00000366744 ZNF451Q9Y4E5 1061 aa8.88□□□□□ -0.99
MRPL55-216ENST00000366744 KCNE1BA0A087WTH5 132 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 A0A087X1B8 175 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 A0A0A6YYC8 382 aaPredicted RBP8.87□□□□□ -0.99
MRPL55-216ENST00000366744 TRBC2A0A5B9 178 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 SYCE1LA8MT33 242 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 SUPT3HB4E1H0 165 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 I3L1I5 382 aaPredicted RBP8.87□□□□□ -0.99
MRPL55-216ENST00000366744 AGPSO00116 658 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 PCDH17O14917 1159 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 OR1F1O43749 312 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 SUPT3HO75486 399 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 KLF7O75840 302 aaPredicted RBP8.87□□□□□ -0.99
MRPL55-216ENST00000366744 HEXBP07686 556 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 ACPPP15309 386 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 MMP11P24347 488 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 CCL11P51671 97 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 PGGT1BP53609 377 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 AP2B1P63010 937 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 YBX1P67809 324 aaKnown RBP8.87□□□□□ -0.99
MRPL55-216ENST00000366744 CSNK1G2P78368 415 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 CDC16Q13042 620 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 FAM53BQ14153 422 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 EFTUD2Q15029 972 aaKnown RBP eCLIP8.87□□□□□ -0.991e-12■■■■■ 43.4
MRPL55-216ENST00000366744 HERC3Q15034 1050 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 ZKSCAN8Q15776 578 aaPredicted RBP8.87□□□□□ -0.99
MRPL55-216ENST00000366744 FAM83EQ2M2I3 478 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 FAM69BQ5VUD6 431 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 SHISA6Q6ZSJ9 500 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 ABHD13Q7L211 337 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 PTRH1Q86Y79 214 aaKnown RBP8.87□□□□□ -0.99
MRPL55-216ENST00000366744 PRSS58Q8IYP2 241 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 KRT78Q8N1N4 520 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 SNX31Q8N9S9 440 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 TTLQ8NG68 377 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 STAG3L4Q8TBR4 150 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 SLC13A3Q8WWT9 602 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 NEIL2Q969S2 332 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 CAPS2Q9BXY5 557 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 UNKQ9C0B0 810 aaKnown RBP8.87□□□□□ -0.99
MRPL55-216ENST00000366744 CDC42EP4Q9H3Q1 356 aaKnown RBP8.87□□□□□ -0.99
MRPL55-216ENST00000366744 ACSS3Q9H6R3 686 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 P4HTMQ9NXG6 502 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 NINJ2Q9NZG7 142 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 NUDT4Q9NZJ9 180 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 C3orf18Q9UK00 162 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 FBXL4Q9UKA2 621 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 ACOT9Q9Y305 439 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 MAP4K5Q9Y4K4 846 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 PCDHGB7Q9Y5F8 929 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 PCDHGA9Q9Y5G4 932 aaKnown RBP8.87□□□□□ -0.99
MRPL55-216ENST00000366744 CNTRLQ7Z7A1 2325 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 CPAMD8Q8IZJ3 1885 aa8.87□□□□□ -0.99
MRPL55-216ENST00000366744 NBASA2RRP1 2371 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 A0A087WUV0 522 aaPredicted RBP8.86□□□□□ -0.99
MRPL55-216ENST00000366744 A0A088AWK7 358 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 EXOC1LA0A1B0GW35 172 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 FEZF1A0PJY2 475 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 A6NL46 340 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 H0YIG0 161 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 J3QKU1 62 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 CLGNO14967 610 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 P2RX6O15547 441 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 DPM1O60762 260 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 H2AFYO75367 372 aaKnown RBP8.86□□□□□ -0.99
MRPL55-216ENST00000366744 KRT38O76015 456 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 NSA2O95478 260 aaKnown RBP8.86□□□□□ -0.99
MRPL55-216ENST00000366744 ONECUT2O95948 504 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 STATHP02808 62 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 LTA4HP09960 611 aaKnown RBP8.86□□□□□ -0.99
MRPL55-216ENST00000366744 ZGLP1P0C6A0 271 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 PLA2G2AP14555 144 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 CD1DP15813 335 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 NPPBP16860 134 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 IL1RNP18510 177 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 TFEBP19484 476 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 ZNF10P21506 573 aaPredicted RBP8.86□□□□□ -0.99
MRPL55-216ENST00000366744 ITGA3P26006 1051 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 CNTFP26441 200 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 GSTM2P28161 218 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 SLC26A3P40879 764 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 BCL6P41182 706 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 SERPINB9P50453 376 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 REEP5Q00765 189 aa8.86□□□□□ -0.99
MRPL55-216ENST00000366744 MEF2AQ02078 507 aaPredicted RBP8.86□□□□□ -0.99
MRPL55-216ENST00000366744 KLC1Q07866 573 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms