RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 ARHGEF3Q9NR81 526 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 SMPD3Q9NY59 655 aaPredicted RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 HS3ST2Q9Y278 367 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 TRIM24O15164 1050 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 UGT2B11O75310 529 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 RSL1D1O76021 490 aaKnown RBP13.42□□□□□ -0.26
CTR9-201ENST00000361367 PGM3O95394 542 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 RAP2AP10114 183 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 THRBP10828 461 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 RAB28P51157 221 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 NRG3P56975 720 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 PPP1R3AQ16821 1122 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 EIPR1Q53HC9 387 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 SLC30A8Q8IWU4 369 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 OR52B6Q8NGF0 335 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 PIGXQ8TBF5 258 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 MTERF3Q96E29 417 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 DEPDC7Q96QD5 511 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 OSBPL10Q9BXB5 764 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 TXLNGYQ9BZA5 131 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 DOCK1Q14185 1865 aa13.42□□□□□ -0.26
CTR9-201ENST00000361367 COL4A5P29400 1685 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 E7ENX8 843 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 SDHDO14521 159 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 MFN2O95140 757 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 AGR2O95994 175 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 ZNF24P17028 368 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 TCEA1P23193 301 aaKnown RBP13.41□□□□□ -0.26
CTR9-201ENST00000361367 ZNF140P52738 457 aaPredicted RBP13.41□□□□□ -0.26
CTR9-201ENST00000361367 GPR68Q15743 365 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 SNAPC1Q16533 368 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 UNC5DQ6UXZ4 953 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 FAM81AQ8TBF8 368 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 DTD2Q96FN9 168 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 C6orf62Q9GZU0 229 aaPredicted RBP13.41□□□□□ -0.26
CTR9-201ENST00000361367 KCNH6Q9H252 994 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 RMI1Q9H9A7 625 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 CCNB1IP1Q9NPC3 277 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 AQP12BA6NM10 295 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 GADD45GO95257 159 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 SLC16A8O95907 504 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 CXCL12P48061 93 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 PTGR1Q14914 329 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 SLC14A2Q15849 920 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 PDCD4Q53EL6 469 aaKnown RBP13.41□□□□□ -0.26
CTR9-201ENST00000361367 FGD2Q7Z6J4 655 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 AQP12AQ8IXF9 295 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 OR4K1Q8NGD4 311 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 ARMC5Q96C12 935 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 NCDNQ9UBB6 729 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 JUPP14923 745 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 XRCC1P18887 633 aaPredicted RBP13.41□□□□□ -0.26
CTR9-201ENST00000361367 CCT3P49368 545 aaKnown RBP13.41□□□□□ -0.26
CTR9-201ENST00000361367 GSK3BP49841 420 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 OC90Q02509 493 aaPredicted RBP13.41□□□□□ -0.26
CTR9-201ENST00000361367 TRAP1Q12931 704 aaKnown RBP13.41□□□□□ -0.26
CTR9-201ENST00000361367 MRPL58Q14197 206 aaKnown RBP13.41□□□□□ -0.26
CTR9-201ENST00000361367 NEK5Q6P3R8 708 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 GPR149Q86SP6 731 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 ASPGQ86U10 573 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 TGM7Q96PF1 710 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 TBL1XR1Q9BZK7 514 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 TOR4AQ9NXH8 423 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 PDE10AQ9Y233 779 aa13.41□□□□□ -0.26
CTR9-201ENST00000361367 SOBPA7XYQ1 873 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 GJB3O75712 270 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 CCNB2O95067 398 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 PDYNP01213 254 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 POU2F1P14859 743 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 CDK9P50750 372 aaKnown RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 SGSHP51688 502 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 BNC1Q01954 994 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 PCBP2Q15366 365 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTR9-201ENST00000361367 ANKRD26P1Q6NSI1 321 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 CEACAM20Q6UY09 585 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 USP53Q70EK8 1073 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 TMEM126BQ8IUX1 230 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 DDHD1Q8NEL9 900 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 CD200R1Q8TD46 325 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 BCL7CQ8WUZ0 217 aaPredicted RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 ASB9Q96DX5 294 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 APOOQ9BUR5 198 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 TAPBPLQ9BX59 468 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 SLC12A9Q9BXP2 914 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 CXorf56Q9H5V9 222 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 PDE7BQ9NP56 450 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 TREX1Q9NSU2 369 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 CFL2Q9Y281 166 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 XKRYO14609 159 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 DUX1O43812 170 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 SDC3O75056 442 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 OPN1SWP03999 348 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 ITGA1P56199 1179 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 RPA4Q13156 261 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 PTCRAQ6ISU1 281 aaPredicted RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 OR2A12Q8NGT7 310 aa13.4□□□□□ -0.26
CTR9-201ENST00000361367 GTPBP3Q969Y2 492 aaKnown RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 MMABQ96EY8 250 aaPredicted RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 CLK4Q9HAZ1 481 aaKnown RBP13.4□□□□□ -0.26
CTR9-201ENST00000361367 NECTIN3Q9NQS3 549 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms