RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 SOX4Q06945 474 aaPredicted RBP14.44□□□□□ -0.1
UBAP1-202ENST00000359544 QPRTQ15274 297 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 PCBP2Q15366 365 aaKnown RBP eCLIP14.44□□□□□ -0.12e-10■■■■□ 23.6
UBAP1-202ENST00000359544 ZNF79Q15937 498 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 CTRB2Q6GPI1 263 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 GPR153Q6NV75 609 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 GOLGA7Q7Z5G4 137 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 ZZZ3Q8IYH5 903 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 PGBD5Q8N414 524 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 YIPF7Q8N8F6 280 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 TP53I13Q8NBR0 393 aaPredicted RBP14.44□□□□□ -0.1
UBAP1-202ENST00000359544 OR13C4Q8NGS5 318 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 TADA1Q96BN2 335 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 SMARCD1Q96GM5 515 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 PCED1BQ96HM7 432 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 ABCB8Q9NUT2 735 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 MIOSQ9NXC5 875 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 GPR83Q9NYM4 423 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 VPS9D1Q9Y2B5 631 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 CCL27Q9Y4X3 112 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 COL4A4P53420 1690 aaPredicted RBP14.44□□□□□ -0.1
UBAP1-202ENST00000359544 MICAL3Q7RTP6 2002 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 SNTNA6NMZ2 147 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 WASH4PA8MWX3 477 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 E9PAM4 449 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 MYOGP15173 224 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 UQCRC1P31930 480 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 MRPS6P82932 125 aaKnown RBP14.44□□□□□ -0.1
UBAP1-202ENST00000359544 VLDLRP98155 873 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 RUNX1T1Q06455 604 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 SLC10A7Q0GE19 358 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 ST3GAL4Q11206 333 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 GTF2H2Q13888 395 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 PTPRCAPQ14761 206 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 TAB1Q15750 504 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 TSTQ16762 297 aaKnown RBP14.44□□□□□ -0.1
UBAP1-202ENST00000359544 TJAP1Q5JTD0 557 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 GTF2H2CQ6P1K8 395 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 LINGO1Q96FE5 620 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 OSMRQ99650 979 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 UCK2Q9BZX2 261 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 SP110Q9HB58 689 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 AMBNQ9NP70 447 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 SIRT5Q9NXA8 310 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 MAPRE3Q9UPY8 281 aa14.44□□□□□ -0.1
UBAP1-202ENST00000359544 LINC00854A0A1B0GVQ3 168 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 LEUTXA8MZ59 168 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 OR7A17O14581 309 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 TMCC2O75069 709 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 OR2B3O76000 313 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 CPN2P22792 545 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 AZGP1P25311 298 aaKnown RBP14.43□□□□□ -0.1
UBAP1-202ENST00000359544 PTGS2P35354 604 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 RORCP51449 518 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 CYP4F2P78329 520 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 DAB2P98082 770 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 MGAT3Q09327 533 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 EIF4EBP2Q13542 120 aaPredicted RBP14.43□□□□□ -0.1
UBAP1-202ENST00000359544 BTBD16Q32M84 506 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 ZMAT1Q5H9K5 638 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 SLC35F1Q5T1Q4 408 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 ERICH5Q6P6B1 374 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 FAM171BQ6P995 826 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.43□□□□□ -0.1
UBAP1-202ENST00000359544 MILR1Q7Z6M3 343 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 SERPINA11Q86U17 422 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 ZNF598Q86UK7 904 aaKnown RBP14.43□□□□□ -0.1
UBAP1-202ENST00000359544 C10orf111Q8N326 155 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 FAM181AQ8N9Y4 354 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 DENND6BQ8NEG7 585 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 COQ8BQ96D53 544 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 KLHL5Q96PQ7 755 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 KCNC2Q96PR1 638 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 SLC6A13Q9NSD5 602 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 ARIH1Q9Y4X5 557 aaPredicted RBP14.43□□□□□ -0.1
UBAP1-202ENST00000359544 TSPAN9O75954 239 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 WDR47O94967 919 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 TSPAN12O95859 305 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 CCNYL3P0C7X3 344 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 CD52P31358 61 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 LHX1P48742 406 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 PSPHP78330 225 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 DEFB103AP81534 67 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 XKR4Q5GH76 650 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 LRRC66Q68CR7 880 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 MSANTD2Q6P1R3 559 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 AFTPHQ6ULP2 937 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 RNF165Q6ZSG1 346 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 KRTCAP2Q8N6L1 136 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 TOR1AIP2Q8NFQ8 470 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 ENKURQ8TC29 256 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 CDKN2AIPNLQ96HQ2 116 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 MGLLQ99685 303 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 AIFM2Q9BRQ8 373 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 GTPBP2Q9BX10 602 aaKnown RBP14.43□□□□□ -0.1
UBAP1-202ENST00000359544 ASPNQ9BXN1 380 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 TMEM30AQ9NV96 361 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 ING3Q9NXR8 418 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 MAT2BQ9NZL9 334 aa14.43□□□□□ -0.1
UBAP1-202ENST00000359544 MPP6Q9NZW5 540 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms