RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 DDX6P26196 483 aaKnown RBP eCLIP10.8□□□□□ -0.68
SSU72-202ENST00000359060 MAT2AP31153 395 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 SHMT2P34897 504 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 CTSKP43235 329 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 RFX3P48380 749 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 NUDT6P53370 316 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ALDH6A1Q02252 535 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 PPIGQ13427 754 aaKnown RBP eCLIP10.8□□□□□ -0.68
SSU72-202ENST00000359060 DGUOKQ16854 277 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 SYT16Q17RD7 645 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 SPIN4Q56A73 249 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 PRAMEF14Q5SWL7 426 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 PRAMEF13Q5VWM6 474 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ANKRD34AQ69YU3 496 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 SDE2Q6IQ49 451 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 RNF168Q8IYW5 571 aaPredicted RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 OR9Q1Q8NGQ5 310 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 RAB2BQ8WUD1 216 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 POP5Q969H6 163 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 UHRF1Q96T88 793 aaPredicted RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 NAA50Q9GZZ1 169 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 KAT8Q9H7Z6 458 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 DCAF13Q9NV06 445 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 TRBV23OR9-2A0A075B6M9 112 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 SLC16A5O15375 505 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 NR2F1P10589 423 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 FPR1P21462 350 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 CXCR2P25025 360 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 CCR2P41597 374 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 RPS6KA3P51812 740 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 NFE2L1Q14494 772 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 PAGE2Q7Z2X7 111 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 TRIM46Q7Z4K8 759 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 CYP4Z1Q86W10 505 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 PGBD3Q8N328 593 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 CELF5Q8N6W0 485 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 RASGEF1AQ8N9B8 481 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 BORCS5Q969J3 196 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 COL26A1Q96A83 441 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 EPS8L2Q9H6S3 715 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ITM2CQ9NQX7 267 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 GIMAP4Q9NUV9 329 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 DNMT3BQ9UBC3 853 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 GRXCR2A6NFK2 248 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 WASH3PC4AMC7 463 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 OR10H3O60404 316 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ITGA2P17301 1181 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 SCARB2Q14108 478 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 IFI44LQ53G44 452 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 TMIGD1Q6UXZ0 262 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 LIPIQ6XZB0 460 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 FAM124AQ86V42 546 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 OR9A1PQ8NGU1 263 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 NFKBIDQ8NI38 313 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 NEIL2Q969S2 332 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ZHX1-C8orf76Q96EF9 292 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ZBP1Q9H171 429 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ACTL8Q9H568 366 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 GORASP2Q9H8Y8 452 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ZFC3H1O60293 1989 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 CNTRLQ7Z7A1 2325 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 RTCAO00442 366 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 SLC28A2O43868 658 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 TFPTP0C1Z6 253 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ACP5P13686 325 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 APOFQ13790 326 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 TEAD4Q15561 434 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 FAM46CQ5VWP2 391 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 EIF3MQ7L2H7 374 aaKnown RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 ANKRD33Q7Z3H0 272 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 BPIFB1Q8TDL5 484 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 ADAMTS19Q8TE59 1207 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 WFIKKN2Q8TEU8 576 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 NPLQ9BXD5 320 aaPredicted RBP10.8□□□□□ -0.68
SSU72-202ENST00000359060 HMG20AQ9NP66 347 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 SLC25A37Q9NYZ2 338 aa10.8□□□□□ -0.68
SSU72-202ENST00000359060 EIF3FO00303 357 aaPredicted RBP10.79□□□□□ -0.68
SSU72-202ENST00000359060 IGHA2P01877 340 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 ALPLP05186 524 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 ETFAP13804 333 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 MAPK9P45984 424 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 RXRGP48443 463 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 CLCNKAP51800 687 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 GSTM4Q03013 218 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 ZNF763Q0D2J5 394 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 ASTLQ6HA08 431 aaPredicted RBP10.79□□□□□ -0.68
SSU72-202ENST00000359060 PARS2Q7L3T8 475 aaKnown RBP10.79□□□□□ -0.68
SSU72-202ENST00000359060 SLC5A11Q8WWX8 675 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 QRFPRQ96P65 431 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 TM9SF3Q9HD45 589 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 CTPS2Q9NRF8 586 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 TMEM45AQ9NWC5 275 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 PCDHGB3Q9Y5G1 929 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 LINC00854A0A1B0GVQ3 168 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 ZNF99A8MXY4 864 aaPredicted RBP10.79□□□□□ -0.68
SSU72-202ENST00000359060 ADAMDEC1O15204 470 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 RETP07949 1114 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 TCF3P15923 654 aa10.79□□□□□ -0.68
SSU72-202ENST00000359060 HOXB6P17509 224 aaKnown RBP10.79□□□□□ -0.68
SSU72-202ENST00000359060 TIA1P31483 386 aaKnown RBP eCLIP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms