RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 NSMCE2Q96MF7 247 aa16.97■□□□□ 0.31
NPAS3-202ENST00000356141 LTB4R2Q9NPC1 389 aa16.97■□□□□ 0.31
NPAS3-202ENST00000356141 SERHLQ9NQF3 203 aa16.97■□□□□ 0.31
NPAS3-202ENST00000356141 ACTR3BQ9P1U1 418 aa16.97■□□□□ 0.31
NPAS3-202ENST00000356141 SPASTQ9UBP0 616 aa16.97■□□□□ 0.31
NPAS3-202ENST00000356141 MTCH2Q9Y6C9 303 aa16.97■□□□□ 0.31
NPAS3-202ENST00000356141 RNF103-CHMP3A0A140T963 221 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 LYNP07948 512 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 HSD17B1P14061 328 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 ATP6V1B1P15313 513 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 KIR3DL1P43629 444 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 ALDH9A1P49189 494 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 MLF2Q15773 248 aaPredicted RBP16.96■□□□□ 0.31
NPAS3-202ENST00000356141 ZIK1Q3SY52 487 aaPredicted RBP16.96■□□□□ 0.31
NPAS3-202ENST00000356141 LIPJQ5W064 366 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 GRHL2Q6ISB3 625 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 FCRL4Q96PJ5 515 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 F2RL3Q96RI0 385 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 UHRF1Q96T88 793 aaPredicted RBP16.96■□□□□ 0.31
NPAS3-202ENST00000356141 SPOCK3Q9BQ16 436 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 ADGRE2Q9UHX3 823 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 WDFY3Q8IZQ1 3526 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 SCN3AQ9NY46 2000 aa16.96■□□□□ 0.31
NPAS3-202ENST00000356141 SNRNP200O75643 2136 aaKnown RBP16.96■□□□□ 0.31
NPAS3-202ENST00000356141 FPGTO14772 594 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 VEGFDO43915 354 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 PCDH7O60245 1069 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 ADH1BP00325 375 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 NDUFV2P19404 249 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 CLDN8P56748 225 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 PRKCQQ04759 706 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 TRAP1Q12931 704 aaKnown RBP16.96■□□□□ 0.3
NPAS3-202ENST00000356141 PDK3Q15120 406 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 NKG7Q16617 165 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 CYP27C1Q4G0S4 372 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 PDZD3Q86UT5 571 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 LINC01555Q8NAE3 123 aa16.96■□□□□ 0.3
NPAS3-202ENST00000356141 PAIP1Q9H074 479 aaKnown RBP16.96■□□□□ 0.3
NPAS3-202ENST00000356141 PLXND1Q9Y4D7 1925 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 GRXCR2A6NFK2 248 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 GABRR3A8MPY1 467 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 CEACAM5P06731 702 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 VASPP50552 380 aaPredicted RBP16.95■□□□□ 0.3
NPAS3-202ENST00000356141 ZNF385BQ569K4 471 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 COMMD6Q7Z4G1 85 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 SMRP1Q8NCR6 262 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 PATE1Q8WXA2 126 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 RAB7BQ96AH8 199 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 FAM120BQ96EK7 910 aaKnown RBP16.95■□□□□ 0.3
NPAS3-202ENST00000356141 MRGPRX1Q96LB2 322 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 PCDHGA11Q9Y5H2 935 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 KIAA1549LQ6ZVL6 1849 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 ZNF682O95780 498 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 IL6P05231 212 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 GNAO1P09471 354 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 PLA2G16P53816 162 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 RPS21P63220 83 aaKnown RBP16.95■□□□□ 0.3
NPAS3-202ENST00000356141 ZCCHC8Q6NZY4 707 aaKnown RBP16.95■□□□□ 0.3
NPAS3-202ENST00000356141 ADAMTSL4Q6UY14 1074 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 ZNF852Q6ZMS4 543 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 ZNF761Q86XN6 746 aaPredicted RBP16.95■□□□□ 0.3
NPAS3-202ENST00000356141 EPHX4Q8IUS5 362 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 NETO1Q8TDF5 533 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 GBP5Q96PP8 586 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 CHID1Q9BWS9 393 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 PHPT1Q9NRX4 125 aaPredicted RBP16.95■□□□□ 0.3
NPAS3-202ENST00000356141 SLCO1B1Q9Y6L6 691 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 SCN2AQ99250 2005 aa16.95■□□□□ 0.3
NPAS3-202ENST00000356141 PRKRAO75569 313 aaKnown RBP16.94■□□□□ 0.3
NPAS3-202ENST00000356141 C1GALT1C1LP0DN25 315 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 ZNF23P17027 643 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 ZNF24P17028 368 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 IL10P22301 178 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 ZNF765Q7L2R6 523 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 GALNT13Q8IUC8 556 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 SLC44A3Q8N4M1 653 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 RAD51AP1Q96B01 352 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 TPSD1Q9BZJ3 242 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 KLF15Q9UIH9 416 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 GLOD5A6NK44 160 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 CASQ2O14958 399 aaPredicted RBP16.94■□□□□ 0.3
NPAS3-202ENST00000356141 TAS2R50P59544 299 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 PRSS53Q2L4Q9 553 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 GGTA1PQ4G0N0 100 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 TBPL2Q6SJ96 375 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 NXPE4Q6UWF7 544 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 OFCC1Q8IZS5 231 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 AMER3Q8N944 861 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 MAGEE2Q8TD90 523 aaPredicted RBP16.94■□□□□ 0.3
NPAS3-202ENST00000356141 CENPOQ9BU64 300 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 VCX3BQ9H321 246 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 RAPGEFL1Q9UHV5 662 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 ANAPC2Q9UJX6 822 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 GPR34Q9UPC5 381 aa16.94■□□□□ 0.3
NPAS3-202ENST00000356141 PRKD3O94806 890 aa16.93■□□□□ 0.3
NPAS3-202ENST00000356141 RASGRP1O95267 797 aa16.93■□□□□ 0.3
NPAS3-202ENST00000356141 ZNF26P17031 533 aaPredicted RBP16.93■□□□□ 0.3
NPAS3-202ENST00000356141 ENGP17813 658 aa16.93■□□□□ 0.3
NPAS3-202ENST00000356141 GRIK2Q13002 908 aa16.93■□□□□ 0.3
NPAS3-202ENST00000356141 METRNLQ641Q3 311 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 206.6 ms