RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 GET4Q7L5D6 327 aaPredicted RBP12.91□□□□□ -0.34
NCDN-201ENST00000356090 NXPE1Q8N323 547 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 VANGL1Q8TAA9 524 aaPredicted RBP12.91□□□□□ -0.34
NCDN-201ENST00000356090 NTMT1Q9BV86 223 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 SLC45A1Q9Y2W3 748 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 H3BM21 787 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 H3BN98 237 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 J3KTA2 159 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 PRRG1O14668 218 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 SYN3O14994 580 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 PRPS1L1P21108 318 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 CCR7P32248 378 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 FEN1P39748 380 aaKnown RBP12.91□□□□□ -0.34
NCDN-201ENST00000356090 SLC11A1P49279 550 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 UBE3AQ05086 875 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 VRK3Q8IV63 474 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 FAM9CQ8IZT9 166 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 NAGSQ8N159 534 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 GPR26Q8NDV2 337 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 UBASH3BQ8TF42 649 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 GGHQ92820 318 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.91□□□□□ -0.34
NCDN-201ENST00000356090 ZDHHC6Q9H6R6 413 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 SNTG1Q9NSN8 517 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 TMEM161AQ9NX61 479 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 LHX3Q9UBR4 397 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 ZNF221Q9UK13 617 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 WBP11Q9Y2W2 641 aaKnown RBP12.91□□□□□ -0.34
NCDN-201ENST00000356090 PCDHGB3Q9Y5G1 929 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 PCDHGA6Q9Y5G7 932 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 GREB1Q4ZG55 1949 aa12.91□□□□□ -0.34
NCDN-201ENST00000356090 H3BNC9 293 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 M0QX08 132 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 NDUFB5O43674 189 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 SOX14O95416 240 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 OR56A5P0C7T3 313 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 ETFAP13804 333 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 CHI3L1P36222 383 aaPredicted RBP12.9□□□□□ -0.34
NCDN-201ENST00000356090 PPIGQ13427 754 aaKnown RBP eCLIP12.9□□□□□ -0.341e-6■■□□□ 14.1
NCDN-201ENST00000356090 LRIT3Q3SXY7 679 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 CXorf57Q6NSI4 855 aaKnown RBP12.9□□□□□ -0.34
NCDN-201ENST00000356090 PTCHD4Q6ZW05 846 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 EIF3MQ7L2H7 374 aaKnown RBP12.9□□□□□ -0.34
NCDN-201ENST00000356090 FBXO22Q8NEZ5 403 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 PDLIM5Q96HC4 596 aaKnown RBP12.9□□□□□ -0.34
NCDN-201ENST00000356090 DEPDC7Q96QD5 511 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 PSD2Q9BQI7 771 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 TMEM121BQ9BXQ6 578 aaPredicted RBP12.9□□□□□ -0.34
NCDN-201ENST00000356090 CPNE5Q9HCH3 593 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 TIGARQ9NQ88 270 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 TMEM45AQ9NWC5 275 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 NAALAD2Q9Y3Q0 740 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 PCDHGB6Q9Y5F9 930 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 ZNF840PA6NDX5 716 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 METTL15A6NJ78 407 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 ZW10O43264 779 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 PCDH7O60245 1069 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 NUAK1O60285 661 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 CKMP06732 381 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 JUNDP17535 347 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 TGFBR2P37173 567 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 FLT3LGP49771 235 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 STK19P49842 368 aaPredicted RBP12.9□□□□□ -0.34
NCDN-201ENST00000356090 CCDC85BQ15834 202 aaPredicted RBP12.9□□□□□ -0.34
NCDN-201ENST00000356090 UGT8Q16880 541 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 EXOC3L2Q2M3D2 409 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 GPRC6AQ5T6X5 926 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 CALHM3Q86XJ0 350 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 SLC34A3Q8N130 599 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 ARL14EPQ8N8R7 260 aaPredicted RBP12.9□□□□□ -0.34
NCDN-201ENST00000356090 TRIB2Q92519 343 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 CCM2Q9BSQ5 444 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 SGK2Q9HBY8 427 aa12.9□□□□□ -0.34
NCDN-201ENST00000356090 M0R082 166 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 F11P03951 625 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 SLC10A3P09131 477 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 CYP2A7P20853 494 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 NSG1P42857 185 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 SLC15A1P46059 708 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 TUBA1BP68363 451 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 SYTL3Q4VX76 610 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 C10orf62Q5T681 223 aaPredicted RBP12.9□□□□□ -0.35
NCDN-201ENST00000356090 ALG1LQ6GMV1 187 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 TUBA1AQ71U36 451 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 CSGALNACT1Q8TDX6 532 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 TMEM203Q969S6 136 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 ZNF566Q969W8 418 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 CMTM7Q96FZ5 175 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 ZNF486Q96H40 463 aaPredicted RBP12.9□□□□□ -0.35
NCDN-201ENST00000356090 OR5M11Q96RB7 305 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 NIPSNAP1Q9BPW8 284 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 SLC29A3Q9BZD2 475 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 TMEM184CQ9NVA4 438 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 VPS29Q9UBQ0 182 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 OSGIN1Q9UJX0 560 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 GABRQQ9UN88 632 aa12.9□□□□□ -0.35
NCDN-201ENST00000356090 TDRD15B5MCY1 1934 aaKnown RBP12.89□□□□□ -0.35
NCDN-201ENST00000356090 TRBV5-3A0A0A0MS03 114 aa12.89□□□□□ -0.35
NCDN-201ENST00000356090 NPIPB15A6NHN6 443 aaPredicted RBP12.89□□□□□ -0.35
NCDN-201ENST00000356090 FAM227AF5H4B4 570 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms