RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 DMXL2Q8TDJ6 3036 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 CHD8Q9HCK8 2581 aa17.08■□□□□ 0.32
PDLIM7-202ENST00000355841 TRBC2A0A5B9 178 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 SRPX2O60687 465 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 H2AFYO75367 372 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 SERPIND1P05546 499 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 ETV4P43268 484 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 RELAQ04206 551 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 RBBP7Q16576 425 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 METTL2BQ6P1Q9 378 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 CYB5D1Q6P9G0 228 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 ANKRD42Q8N9B4 389 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 MFSD9Q8NBP5 474 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 OR8K5Q8NH50 307 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 L3HYPDHQ96EM0 354 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 PTCD3Q96EY7 689 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 NAF1Q96HR8 494 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 PKNOX2Q96KN3 472 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 ZNF285Q96NJ3 590 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 TEFMQ96QE5 360 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 SH3GL2Q99962 352 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 ZPBPQ9BS86 351 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 C1QTNF3Q9BXJ4 246 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 EHD1Q9H4M9 534 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 CCDC86Q9H6F5 360 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 WDR70Q9NW82 654 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 DHCR7Q9UBM7 475 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 ZNF490Q9ULM2 529 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 RNF11Q9Y3C5 154 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 TMEM120BA0PK00 339 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 PRPF4O43172 522 aaKnown RBP eCLIP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 TLX3O43711 291 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 MED26O95402 600 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 SCTRP47872 440 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 PIK3CGP48736 1102 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 ERVPABLB-1P60509 514 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 CLCQ05315 142 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 AGBL2Q5U5Z8 902 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 C1orf189Q5VU69 101 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 TMIGD1Q6UXZ0 262 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 TIPARPQ7Z3E1 657 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 BPHLQ86WA6 291 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 GALNT6Q8NCL4 622 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 CLIP3Q96DZ5 547 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 CCDC126Q96EE4 140 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 WDR34Q96EX3 536 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 ZNF578Q96N58 590 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 SLC7A5P2Q9GIP4 190 aa17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 ACTR5Q9H9F9 607 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 AKIRIN1Q9H9L7 192 aaPredicted RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 RUVBL1Q9Y265 456 aaKnown RBP17.07■□□□□ 0.32
PDLIM7-202ENST00000355841 KCNE1BA0A087WTH5 132 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 WDR91A4D1P6 747 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 NDUFS4O43181 175 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 CCNG1P51959 295 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 TRAF3Q13114 568 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 TGIF1Q15583 401 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 TBCCQ15814 346 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 CPSF6Q16630 551 aaKnown RBP eCLIP17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 TCTE1Q5JU00 501 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 LIPMQ5VYY2 423 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 UNQ6494/PRO21346Q6UXR6 183 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 ZCCHC23Q6ZST2 131 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 KRT78Q8N1N4 520 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 GOLGA6L1Q8N7Z2 621 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 MGARPQ8TDB4 240 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 SLC13A3Q8WWT9 602 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 ATP6V1G3Q96LB4 118 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 EFCAB11Q9BUY7 163 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 SARGQ9BW04 601 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 SPRY4Q9C004 299 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 GSTO2Q9H4Y5 243 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 MID2Q9UJV3 735 aa17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 MDC1Q14676 2089 aaKnown RBP17.06■□□□□ 0.32
PDLIM7-202ENST00000355841 ZFHX4Q86UP3 3567 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 HYKKA2RU49 373 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 CAPNS1P04632 268 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 ALAS2P22557 587 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 CASP2P42575 452 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 SERPINB4P48594 390 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 DNAJB13P59910 316 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 GRM7Q14831 915 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 PRTGQ2VWP7 1150 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 CFAP157Q5JU67 520 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 TLDC1Q6P9B6 456 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 TTLL10Q6ZVT0 673 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 ASPGQ86U10 573 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 RNF175Q8N4F7 328 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 TBC1D19Q8N5T2 526 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 METTL27Q8N6F8 245 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 KCT2Q8NC54 265 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 OR4F6Q8NGB9 312 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 PAIP2Q9BPZ3 127 aaKnown RBP17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 NDC1Q9BTX1 674 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 GATA5Q9BWX5 397 aaPredicted RBP17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 SHCBP1LQ9BZQ2 653 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 PRM3Q9NNZ6 103 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 ZFP69BQ9UJL9 534 aa17.05■□□□□ 0.32
PDLIM7-202ENST00000355841 ZNF225Q9UK10 706 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms