RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 PUM1Q14671 1186 aaKnown RBP eCLIP12.36□□□□□ -0.435e-7■■□□□ 11.8
SYNCRIP-201ENST00000355238 GPR33Q49SQ1 333 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR52E8Q6IFG1 317 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 EFCAB11Q9BUY7 163 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZDHHC7Q9NXF8 308 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 FNIP2Q9P278 1114 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 B3GNT3Q9Y2A9 372 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 MROH1Q8NDA8 1641 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC1A7O00341 560 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 SOCS2O14508 198 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CAPN15O75808 1086 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CELF2O95319 508 aaKnown RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 BMP2P12643 396 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 SRCP12931 536 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CHMP24386 653 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CHRNA4P43681 627 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 FGL1Q08830 312 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 UAP1L1Q3KQV9 507 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 TXNRD3NBQ6F5E7 133 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 PARGQ86W56 976 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 SAMD12Q8N8I0 201 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 NEIL3Q8TAT5 605 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 PSKH2Q96QS6 385 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 TP63Q9H3D4 680 aaPredicted RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CTPS2Q9NRF8 586 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZCCHC3Q9NUD5 404 aaKnown RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CDH7Q9ULB5 785 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 PCDHGB5Q9Y5G0 923 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 H3BMQ9 156 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 SDHDO14521 159 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 GADD45AP24522 165 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 BRCC3P46736 316 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 SP140Q13342 867 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 C10orf62Q5T681 223 aaPredicted RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 MMAAQ8IVH4 418 aaKnown RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 NFKBIDQ8NI38 313 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 ASB15Q8WXK1 588 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 COG8Q96MW5 612 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 FBXW2Q9UKT8 454 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 KCNIP3Q9Y2W7 256 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 SMIM35A0A1B0GVV1 85 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF670-ZNF695F2Z2N8 137 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 GRID2O43424 1007 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 UPK1BO75841 260 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CORO1AP31146 461 aaKnown RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 UGT2B10P36537 528 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 NRIP1P48552 1158 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 RGS19P49795 217 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 EVX2Q03828 476 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 GAD2Q05329 585 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 PSD4Q8NDX1 1056 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR4F6Q8NGB9 312 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR10G6Q8NH81 332 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 KIAA1191Q96A73 305 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 MGLLQ99685 303 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 TMEM106CQ9BVX2 250 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 ARL6Q9H0F7 186 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 DPEP3Q9H4B8 488 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 RGCCQ9H4X1 137 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 BEX1Q9HBH7 125 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 ASB3Q9Y575 518 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 MANBAO00462 879 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CAPN5O15484 640 aaPredicted RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 GKN3PP0CG01 181 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CDK4P11802 303 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 TARBP2Q15633 366 aaKnown RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 SPANXN4Q5MJ08 99 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 TCEANCQ8N8B7 351 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 MEAF6Q9HAF1 191 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 ERVK13-1Q9NX77 482 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 CPA4Q9UI42 421 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 SH2B3Q9UQQ2 575 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 FARSAQ9Y285 508 aaKnown RBP12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 TLR6Q9Y2C9 796 aa12.36□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR2AG2A6NM03 316 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 E7ESA3 106 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 MRPS14O60783 128 aaKnown RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 SPARCP09486 303 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 NRLP54845 237 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 PIGFQ07326 219 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 GOLGA7Q7Z5G4 137 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZSWIM9Q86XI8 627 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 GDPD1Q8N9F7 314 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 OSTF1Q92882 214 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 COQ8BQ96D53 544 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF599Q96NL3 588 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 ACBD6Q9BR61 282 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 FTHL17Q9BXU8 183 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 MAGIXQ9H6Y5 334 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 TLE6Q9H808 572 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 SACM1LQ9NTJ5 587 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 MGAT4CQ9UBM8 478 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 STUB1Q9UNE7 303 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 MAFBQ9Y5Q3 323 aaPredicted RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF20P17024 532 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 MPIP34949 423 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 NCBP2P52298 156 aaKnown RBP eCLIP12.35□□□□□ -0.431e-6■■□□□ 13
SYNCRIP-201ENST00000355238 TCEAL6Q6IPX3 200 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 VWA5B2Q8N398 1253 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 ATP6V1C2Q8NEY4 427 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms