RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ELP6Q0PNE2 266 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 PAGE2BQ5JRK9 111 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 ANKRD34AQ69YU3 496 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 EP400NLQ6ZTU2 488 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 CFAP206Q8IYR0 622 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 RAB2BQ8WUD1 216 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 SNX19Q92543 992 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 NEIL2Q969S2 332 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 ZNF566Q969W8 418 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 ZNF514Q96K75 400 aaPredicted RBP21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 WRAP53Q9BUR4 548 aaKnown RBP21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 EFCAB11Q9BUY7 163 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 ERVK-11Q9UQG0 969 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 RWDD3Q9Y3V2 267 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 DYRK1BQ9Y463 629 aa21.47■■□□□ 1.03
NKX2-1-201ENST00000354822 NOTCH4Q99466 2003 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 CYP17A1P05093 508 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 IDSP22304 550 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 GTF2H3Q13889 308 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 CTU2Q2VPK5 515 aaKnown RBP21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 RBM23Q86U06 439 aaKnown RBP21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 HORMAD1Q86X24 394 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 NPAS3Q8IXF0 933 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 TMIEQ8NEW7 156 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 ZNF480Q8WV37 535 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 HERVK_113Q902F9 699 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 FOXJ1Q92949 421 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 ZNF282Q9UDV7 671 aaPredicted RBP21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 FZD4Q9ULV1 537 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 ABCG2Q9UNQ0 655 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 BTBD3Q9Y2F9 522 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 GNG14A0A1W2PPG7 69 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 RNASET2O00584 256 aaKnown RBP21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 YY2O15391 372 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 FKBP9O95302 570 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 EPCAMP16422 314 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 CCNA2P20248 432 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 MATN1P21941 496 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 PBLDP30039 288 aaPredicted RBP21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 RXRGP48443 463 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 EMP3P54852 163 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 KEAP1Q14145 624 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 HIST2H2ACQ16777 129 aaPredicted RBP21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 KDM4DQ6B0I6 523 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 HIST2H2AA3Q6FI13 130 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 SYTL1Q8IYJ3 562 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 BHLHE41Q9C0J9 482 aaPredicted RBP21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 EHD1Q9H4M9 534 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 ITM2CQ9NQX7 267 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 VNN3Q9NY84 501 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 VPS4AQ9UN37 437 aa21.46■■□□□ 1.03
NKX2-1-201ENST00000354822 C17orf113A0A1B0GUU1 675 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 C1orf226A1L170 272 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 M0QX08 132 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 ITGB7P26010 798 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 RPS13P62277 151 aaKnown RBP21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 CDK5R2Q13319 367 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 HKDC1Q2TB90 917 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 TMPRSS11BQ86T26 416 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 ZNF366Q8N895 744 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 LTB4R2Q9NPC1 389 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 GULP1Q9UBP9 304 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 ATP6V1HQ9UI12 483 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 ITM2BQ9Y287 266 aa21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 MRPS23Q9Y3D9 190 aaKnown RBP21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 HEMK1Q9Y5R4 338 aaPredicted RBP21.45■■□□□ 1.02
NKX2-1-201ENST00000354822 MYO1GB0I1T2 1018 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 SLC1A7O00341 560 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 NPPBP16860 134 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 CEBPBP17676 345 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 RPL3P39023 403 aaKnown RBP21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 TEAD4Q15561 434 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 SF1Q15637 639 aaKnown RBP21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 ANKRD26P1Q6NSI1 321 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 CYP4Z1Q86W10 505 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 LAS2Q8IYD9 372 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 OR9A1PQ8NGU1 263 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 ZFP90Q8TF47 636 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 HSH2DQ96JZ2 352 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 LINC00615Q96LM1 132 aaPredicted RBP21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 NODALQ96S42 347 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 SGPP1Q9BX95 441 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 LHPPQ9H008 270 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 GPN2Q9H9Y4 310 aaPredicted RBP21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 ATAD3AQ9NVI7 634 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 DPP7Q9UHL4 492 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 FAF1Q9UNN5 650 aaPredicted RBP21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 NAALAD2Q9Y3Q0 740 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 LINC01553A4QN01 128 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 PCDH7O60245 1069 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 LILRB5O75023 590 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 JRKO75564 520 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 C1GALT1C1LP0DN25 315 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 IRS1P35568 1242 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 DAPP51397 102 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 TBPL1P62380 186 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 RGNQ15493 299 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 GTF2IRD2BQ6EKJ0 949 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 GTF2IRD2Q86UP8 949 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 VN1R2Q8NFZ6 395 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms