RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 GMFGO60234 142 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 SOCS5O75159 536 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 TRIM3O75382 744 aaPredicted RBP10.57□□□□□ -0.72
CLCN6-202ENST00000346436 P04436 131 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 CYP17A1P05093 508 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 CBX5P45973 191 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 DNASE1L1P49184 302 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 PLA2G16P53816 162 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 BNIP3Q12983 259 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 PDCD4Q53EL6 469 aaKnown RBP10.57□□□□□ -0.72
CLCN6-202ENST00000346436 AMIGO1Q86WK6 493 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 DAZLQ92904 295 aaKnown RBP10.57□□□□□ -0.72
CLCN6-202ENST00000346436 MTERF3Q96E29 417 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 ACTL8Q9H568 366 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 PRODH2Q9UF12 536 aa10.57□□□□□ -0.72
CLCN6-202ENST00000346436 GLI3P10071 1580 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 KDELR3O43731 214 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 MYCLP1P12525 358 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 CD68P34810 354 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 RCVRNP35243 200 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 CAPGP40121 348 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 HERC3Q15034 1050 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 PKDCCQ504Y2 493 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 TCTE1Q5JU00 501 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 STEAP4Q687X5 459 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 KIAA0895LQ68EN5 471 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 TRAF7Q6Q0C0 670 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF598Q86UK7 904 aaKnown RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 VN1R2Q8NFZ6 395 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 CPEB1Q9BZB8 566 aaKnown RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 GABRDO14764 452 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 CBSLP0DN79 551 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 CBSP35520 551 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 KCNQ1P51787 676 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 GRB7Q14451 532 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 CTC1Q2NKJ3 1217 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 TMEM31Q5JXX7 168 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 TMPPEQ6ZT21 453 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF554Q86TJ5 538 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 CMTM7Q96FZ5 175 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 SMG9Q9H0W8 520 aaKnown RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 IKZF3Q9UKT9 509 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 OGDHLQ9ULD0 1010 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 SH3GLB1Q9Y371 365 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 ELOA3DA6NLF2 546 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 SUV39H1O43463 412 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 STAT5AP42229 794 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 RHDQ02161 417 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 DMPKQ09013 629 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 CBX3Q13185 183 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 SMAD4Q13485 552 aaKnown RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 ELOA3BQ3SY89 546 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF789Q5FWF6 425 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 GTF2IRD2BQ6EKJ0 949 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 GTF2IRD2Q86UP8 949 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 TCEAL8Q8IYN2 117 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 ELOA3Q8NG57 546 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 OR52J3Q8NH60 311 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 SHKBP1Q8TBC3 707 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 UHRF1Q96T88 793 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 FEM1AQ9BSK4 669 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 PHF7Q9BWX1 381 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 ZCWPW2A0A1B0GU75 182 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 J3QRK9 145 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 RFPL2O75678 378 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 ATP1B2P14415 290 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 GK3PQ14409 553 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 RSBN1Q5VWQ0 802 aaPredicted RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 HSDL2Q6YN16 418 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 TMEM135Q86UB9 458 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 CILP2Q8IUL8 1156 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 OLIG1Q8TAK6 271 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 EEF1AKMT1Q8WVE0 214 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 FBXL8Q96CD0 374 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 RTP4Q96DX8 246 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 SLC35G5Q96KT7 338 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 TGM7Q96PF1 710 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 HHIPQ96QV1 700 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 USB1Q9BQ65 265 aaKnown RBP10.56□□□□□ -0.72
CLCN6-202ENST00000346436 MKS1Q9NXB0 559 aa10.56□□□□□ -0.72
CLCN6-202ENST00000346436 ELOVL7A1L3X0 281 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 BHMG1C9JSJ3 638 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 POLR1CO15160 346 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 OR2B3O76000 313 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 GDF5P43026 501 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 GSK3BP49841 420 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 CAPZA1P52907 286 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 ARG2P78540 354 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 C2CD4AQ8NCU7 369 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 CDC6Q99741 560 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 NGBQ9NPG2 151 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 MKKSQ9NPJ1 570 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 CLN6Q9NWW5 311 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 PDP1Q9P0J1 537 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 ZBTB42B2RXF5 422 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 PRSS56P0CW18 603 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 RYKP34925 604 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 RING1Q06587 406 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 LCN1P1Q5VSP4 162 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 XKR5Q6UX68 686 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms