RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 TRIT1Q9H3H1 467 aaKnown RBP13.58□□□□□ -0.23
CDK5RAP1-202ENST00000346416 OSGEPL1Q9H4B0 414 aa13.58□□□□□ -0.23
CDK5RAP1-202ENST00000346416 LIMD1Q9UGP4 676 aa13.58□□□□□ -0.23
CDK5RAP1-202ENST00000346416 WDR37Q9Y2I8 494 aa13.58□□□□□ -0.23
CDK5RAP1-202ENST00000346416 PRUNE2Q8WUY3 3088 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 RNF103-CHMP3A0A140T963 221 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SCELO95171 688 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CEACAM5P06731 702 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 LINGO3P0C6S8 592 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 RAP2AP10114 183 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 IGFALSP35858 605 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 DMPKQ09013 629 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ABHD18Q0P651 414 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TMTC4Q5T4D3 741 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CPTPQ5TA50 214 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TMIGD1Q6UXZ0 262 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ZNF621Q6ZSS3 439 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 HORMAD1Q86X24 394 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FAM129CQ86XR2 697 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CLECL1Q8IZS7 167 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SMRP1Q8NCR6 262 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FBXO30Q8TB52 745 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 UBE2E3Q969T4 207 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FAM162AQ96A26 154 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SH3KBP1Q96B97 665 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MENTQ9BUN1 341 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 DUSP26Q9BV47 211 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ZNF576Q9H609 170 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CARS2Q9HA77 564 aaKnown RBP13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FBRSQ9HAH7 460 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 FZD3Q9NPG1 666 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 LMCD1Q9NZU5 365 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TAC3Q9UHF0 121 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SUFUQ9UMX1 484 aa13.58□□□□□ -0.24
CDK5RAP1-202ENST00000346416 EVPLLA8MZ36 301 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CLIC1O00299 241 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ACOX3O15254 700 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CPSF4O95639 269 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 C1QCP02747 245 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 GBAP04062 536 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 EFNA1P20827 205 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PAX7P23759 505 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 HSD17B2P37059 387 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PIK3CBP42338 1070 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CHRNB3Q05901 458 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ZNF763Q0D2J5 394 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CYP2A13Q16696 494 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 NHSL2Q5HYW2 709 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ENPP6Q6UWR7 440 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ISLR2Q6UXK2 745 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ZNF551Q7Z340 670 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 C17orf64Q86WR6 236 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CHERPQ8IWX8 916 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 OR52E4Q8NGH9 312 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 NCLNQ969V3 563 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MYOCQ99972 504 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 C1QTNF7Q9BXJ2 289 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 UGT2B28Q9BY64 529 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SIRT5Q9NXA8 310 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 KCNK6Q9Y257 313 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SLC17A4Q9Y2C5 497 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PIAS3Q9Y6X2 628 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SLC31A1O15431 190 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CLOCKO15516 846 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CREG1O75629 220 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 IDSP22304 550 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 HPCAL1P37235 193 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 CAMKMTQ7Z624 323 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SPRED1Q7Z699 444 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TDHQ8IZJ6 230 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ST13P4Q8IZP2 240 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 KRT78Q8N1N4 520 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 REXO5Q96IC2 774 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 VPS50Q96JG6 964 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 C12orf66Q96MD2 445 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 NECTIN4Q96NY8 510 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 INSM2Q96T92 566 aaPredicted RBP13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PRPF18Q99633 342 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TIMM29Q9BSF4 260 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 BDH2Q9BUT1 245 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 BTBD1Q9H0C5 482 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MOSPD1Q9UJG1 213 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MAPRE3Q9UPY8 281 aa13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 EXO1Q9UQ84 846 aaKnown RBP13.57□□□□□ -0.24
CDK5RAP1-202ENST00000346416 DLGAP1O14490 977 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 EPN2O95208 641 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 RASAL1O95294 804 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 RETP07949 1114 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 ENGP17813 658 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PSMB5P28074 263 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PPP2CBP62714 309 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PPP2CAP67775 309 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 PHEXP78562 749 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 TXNL4AP83876 142 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 RBBP5Q15291 538 aaKnown RBP13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 MLF2Q15773 248 aaPredicted RBP13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 NKG7Q16617 165 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 IER5LQ5T953 404 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 VN1R5Q7Z5H4 357 aa13.56□□□□□ -0.24
CDK5RAP1-202ENST00000346416 SERPINA11Q86U17 422 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms