RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 DEPDC7Q96QD5 511 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 OR2A14Q96R47 310 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 NIPSNAP1Q9BPW8 284 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 SLC30A2Q9BRI3 323 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 TMEM246Q9BRR3 403 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 TSEN34Q9BSV6 310 aaKnown RBP17.19■□□□□ 0.34
VHL-202ENST00000345392 PLCXD1Q9NUJ7 323 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 TAS2R9Q9NYW1 312 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 CENPXA8MT69 81 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 OAZ2O95190 189 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 OPN1SWP03999 348 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 GPX2P18283 190 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 AZGP1P25311 298 aaKnown RBP17.19■□□□□ 0.34
VHL-202ENST00000345392 TNFSF8P32971 234 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 PIK3CBP42338 1070 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 LIMK1P53667 647 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 DUSP4Q13115 394 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 TSTQ16762 297 aaKnown RBP17.19■□□□□ 0.34
VHL-202ENST00000345392 ZXDCQ2QGD7 858 aaPredicted RBP17.19■□□□□ 0.34
VHL-202ENST00000345392 DEFB115Q30KQ5 88 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 ATXN7L2Q5T6C5 722 aaPredicted RBP17.19■□□□□ 0.34
VHL-202ENST00000345392 GALNT12Q8IXK2 581 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 LINC01599Q8WXQ3 324 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 FKBP14Q9NWM8 211 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 MS4A12Q9NXJ0 267 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 ARL15Q9NXU5 204 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 MUTYHQ9UIF7 546 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 VWA8A3KMH1 1905 aa17.19■□□□□ 0.34
VHL-202ENST00000345392 TNFRSF11BO00300 401 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 GAPDHSO14556 408 aaPredicted RBP17.18■□□□□ 0.34
VHL-202ENST00000345392 SCO2O43819 266 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 ACSL4O60488 711 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 SNX4O95219 450 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 DMC1Q14565 340 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 UGT8Q16880 541 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 TSEN54Q7Z6J9 526 aaKnown RBP17.18■□□□□ 0.34
VHL-202ENST00000345392 FUBP3Q96I24 572 aaKnown RBP eCLIP17.18■□□□□ 0.344e-7■■■■■ 29.7
VHL-202ENST00000345392 TRNT1Q96Q11 434 aaKnown RBP17.18■□□□□ 0.34
VHL-202ENST00000345392 SNX18Q96RF0 628 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 EPYCQ99645 322 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 CCM2Q9BSQ5 444 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 PAQR5Q9NXK6 330 aaPredicted RBP17.18■□□□□ 0.34
VHL-202ENST00000345392 PCDHGB3Q9Y5G1 929 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 GJB5O95377 273 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 HMGCLP35914 325 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 OR1E2P47887 323 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 RING1Q06587 406 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 STARD3Q14849 445 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 CYP27C1Q4G0S4 372 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 SNAP47Q5SQN1 464 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 ZNF648Q5T619 568 aaPredicted RBP17.18■□□□□ 0.34
VHL-202ENST00000345392 C17orf99Q6UX52 265 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 ZNF517Q6ZMY9 492 aaPredicted RBP17.18■□□□□ 0.34
VHL-202ENST00000345392 B3GNT7Q8NFL0 401 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 BHMTQ93088 406 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 CAPNS2Q96L46 248 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 CHD5Q8TDI0 1954 aa17.18■□□□□ 0.34
VHL-202ENST00000345392 A0A1W2PQ67 120 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 SUV39H1O43463 412 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 CD160O95971 181 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 CYBAP13498 195 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 RPIAP49247 311 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 DGKEP52429 567 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 CDH4P55283 916 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 WNT3P56703 355 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 ARF5P84085 180 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 PPIGQ13427 754 aaKnown RBP eCLIP17.17■□□□□ 0.34
VHL-202ENST00000345392 GPR50Q13585 617 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 CDK10Q15131 360 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 GPRC6AQ5T6X5 926 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 RNF219Q5W0B1 726 aaPredicted RBP17.17■□□□□ 0.34
VHL-202ENST00000345392 PPP2R2DQ66LE6 453 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 LRRC66Q68CR7 880 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 NOXRED1Q6NXP6 359 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 RNF165Q6ZSG1 346 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 RBFAQ8N0V3 343 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 PGBD3Q8N328 593 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 PIK3R3Q92569 461 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 DHRS1Q96LJ7 313 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 SLC29A3Q9BZD2 475 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 CENPBD1B2RD01 187 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 H3BM21 787 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 SCN2BO60939 215 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 SH3BGRLO75368 114 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 VNN2O95498 520 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 IRF1P10914 325 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 COX7A2P14406 83 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 TBRG1Q3YBR2 411 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 FBXO43Q4G163 708 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 CERS6Q6ZMG9 384 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 SYT12Q8IV01 421 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 OR10G2Q8NGC3 310 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 ZFYVE19Q96K21 471 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 SLC32A1Q9H598 525 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 TPT1P8Q9HAU6 139 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 EXOSC4Q9NPD3 245 aaKnown RBP17.17■□□□□ 0.34
VHL-202ENST00000345392 GKN1Q9NS71 199 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 FZD4Q9ULV1 537 aa17.17■□□□□ 0.34
VHL-202ENST00000345392 CAPN5O15484 640 aaPredicted RBP17.16■□□□□ 0.34
VHL-202ENST00000345392 ANXA5P08758 320 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms