RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 CYP4V2Q6ZWL3 525 aaPredicted RBP17.18■□□□□ 0.34
SMAD4-201ENST00000342988 GRHL3Q8TE85 626 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 ZBTB26Q9HCK0 441 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 ACAD8Q9UKU7 415 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 AKR1C4P17516 323 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 ACTA2P62736 377 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 ACTG2P63267 376 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 REPS2Q8NFH8 660 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 PROKR1Q8TCW9 393 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 MAP3K4Q9Y6R4 1608 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 J3QLW9 94 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 CHEK1O14757 476 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 SLC37A4O43826 429 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 SLITRK5O94991 958 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF19P17023 458 aa17.18■□□□□ 0.34
SMAD4-201ENST00000342988 NELFEP18615 380 aaKnown RBP17.18■□□□□ 0.34
SMAD4-201ENST00000342988 RPS3P23396 243 aaKnown RBP eCLIP17.18■□□□□ 0.341e-8■■■■□ 23.6
SMAD4-201ENST00000342988 ACKR2O00590 384 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 AP2A1O95782 977 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 OR8U9P0C7N5 309 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 GP1BBP13224 206 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 MAOAP21397 527 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 RNF4P78317 190 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 CTBP1Q13363 440 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 PPIGQ13427 754 aaKnown RBP eCLIP17.17■□□□□ 0.348e-6■■■■□ 22.7
SMAD4-201ENST00000342988 FAM174BQ3ZCQ3 159 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 LRRC37A5PQ49AS3 106 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 LPCAT4Q643R3 524 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 GPR153Q6NV75 609 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 AGBL3Q8NEM8 1001 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 OR13C3Q8NGS6 347 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ARHGAP9Q9BRR9 750 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 OPA3Q9H6K4 179 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 KBTBD4Q9NVX7 518 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 UBE2J1Q9Y385 318 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ATP10BO94823 1461 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 NPHP4O75161 1426 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 RGS9O75916 674 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 NFATC1O95644 943 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 PTCHD3Q3KNS1 767 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 SLC39A4Q6P5W5 647 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ATP6V1G2-DDX39BF2Z307 99 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF821O75541 412 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 SLC2A5P22732 501 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 SH3PXD2AQ5TCZ1 1133 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 SLC22A16Q86VW1 577 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 LRRC3Q9BY71 257 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 BTBD1Q9H0C5 482 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 FN3KRPQ9HA64 309 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 FBXO5Q9UKT4 447 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ACSL5Q9ULC5 683 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 TP53BP1Q12888 1972 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF705GA8MUZ8 300 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 LYPLA1O75608 230 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 KLK3P07288 261 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ZSCAN5DPP0CG00 497 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 CTSOP43234 321 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 LEPRP48357 1165 aaKnown RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 DEFA6Q01524 100 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 FGL2Q14314 439 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 TMEM209Q96SK2 561 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 A0A087WUU8 490 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 HMX3A6NHT5 357 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ARL16Q0P5N6 197 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 ZC3H12AQ5D1E8 599 aaKnown RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 SLC44A1Q8WWI5 657 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 TMEM80Q96HE8 168 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 RAB19A4D1S5 217 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 AKR1A1P14550 325 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 FAM198BQ6UWH4 519 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 FAM124AQ86V42 546 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 PTPRJQ12913 1337 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 PI15O43692 258 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 RBBP9O75884 186 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 DCLRE1AQ6PJP8 1040 aa17.17■□□□□ 0.34
SMAD4-201ENST00000342988 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
SMAD4-201ENST00000342988 NPIPA2E9PIF3 369 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 NPIPA3F8WFD2 350 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 MEIS2O14770 477 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 ZNF254O75437 659 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 CLDN11O75508 207 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 CDNFQ49AH0 187 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 TLR10Q9BXR5 811 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 ATG4BQ9Y4P1 393 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 FLRT2O43155 660 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 RNF13O43567 381 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 H1F0P07305 194 aaKnown RBP17.16■□□□□ 0.34
SMAD4-201ENST00000342988 MLLT1Q03111 559 aaPredicted RBP17.16■□□□□ 0.34
SMAD4-201ENST00000342988 SLC10A1Q14973 349 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 BTN2A3PQ96KV6 586 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 AGO3Q9H9G7 860 aaKnown RBP17.16■□□□□ 0.34
SMAD4-201ENST00000342988 TCRBV9S1A1TA0A576 114 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 SLC2A1P11166 492 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 CNPY1Q3B7I2 92 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 CCNJQ5T5M9 372 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 DPEP2Q9H4A9 486 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 SVILO95425 2214 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 SCGB1D1O95968 90 aa17.16■□□□□ 0.34
SMAD4-201ENST00000342988 PDSS2Q86YH6 399 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms