RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 C8orf74Q6P047 294 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 MBOAT1Q6ZNC8 495 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 CEP128Q6ZU80 1094 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 C3orf62Q6ZUJ4 267 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 METTL27Q8N6F8 245 aaPredicted RBP12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 FBXO25Q8TCJ0 367 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 MMABQ96EY8 250 aaPredicted RBP12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 NUDT9Q9BW91 350 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 DERL2Q9GZP9 239 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 SOX17Q9H6I2 414 aaPredicted RBP12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 FAM53CQ9NYF3 392 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 FBXL4Q9UKA2 621 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 MAP4K5Q9Y4K4 846 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 OARD1Q9Y530 152 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 HS3ST3B1Q9Y662 390 aa12.68□□□□□ -0.38
SIRPB3P-201ENST00000340424 MYO18BQ8IUG5 2567 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 MDC1Q14676 2089 aaKnown RBP12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 A0A1W2PQ72 361 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 FAM159BA6NKW6 160 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 A6NL46 340 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 SOCS6O14544 535 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 P2RX6O15547 441 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 NSA2O95478 260 aaKnown RBP12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 SLC35G6P0C7Q6 338 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 CDH1P12830 882 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 SKP1P63208 163 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 KLC1Q07866 573 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 TMEM207Q6UWW9 146 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 IGFL3Q6UXB1 125 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 CAPN12Q6ZSI9 719 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 FRA10AC1Q70Z53 315 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 VN1R4Q7Z5H5 301 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 ASPGQ86U10 573 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 AMER3Q8N944 861 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 OR4K1Q8NGD4 311 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 ALKBH8Q96BT7 664 aaKnown RBP12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 TM4SF19Q96DZ7 209 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 GPR22Q99680 433 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 RBBP8Q99708 897 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 REPIN1Q9BWE0 567 aaKnown RBP12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 TRIM4Q9C037 500 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 SYNPO2LQ9H987 977 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 TRPC4Q9UBN4 977 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 CTNNAL1Q9UBT7 734 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 C3orf18Q9UK00 162 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 MED13Q9UHV7 2174 aa12.67□□□□□ -0.38
SIRPB3P-201ENST00000340424 CCDC88CQ9P219 2028 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 PCSK5Q92824 1860 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 TRBC2A0A5B9 178 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 MAP2K7O14733 419 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 FOXS1O43638 330 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 URI1O94763 535 aaPredicted RBP12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 WISP3O95389 354 aaPredicted RBP12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 GUCA1CO95843 209 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 HPP00738 406 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 ACPPP15309 386 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 STMN1P16949 149 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 CXCR2P25025 360 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 SPRP35270 261 aaPredicted RBP12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 MAGEA4P43358 317 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 ATP6V0D1P61421 351 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 AP2B1P63010 937 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 PWP1Q13610 501 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 USP10Q14694 798 aaKnown RBP12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 CDKL4Q5MAI5 379 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 GRTP1Q5TC63 336 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 TMEM214Q6NUQ4 689 aaKnown RBP12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 KIRREL2Q6UWL6 708 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 PLD3Q8IV08 490 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 SPNS2Q8IVW8 549 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 CEP97Q8IW35 865 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 TCAIMQ8N3R3 496 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 MFSD9Q8NBP5 474 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 MNS1Q8NEH6 495 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 OR11G2Q8NGC1 345 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 SLC5A11Q8WWX8 675 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 PNPLA2Q96AD5 504 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 TSPYL1Q9H0U9 437 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 PELI2Q9HAT8 420 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 SMYD2Q9NRG4 433 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 DYRK1BQ9Y463 629 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 SLC22A7Q9Y694 548 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 KCNE2Q9Y6J6 123 aa12.66□□□□□ -0.38
SIRPB3P-201ENST00000340424 A0A0A6YYC8 382 aaPredicted RBP12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 NPEPPSL1A6NEC2 478 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 IDSB3KWA1 339 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 I3L1I5 382 aaPredicted RBP12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 CDC7O00311 574 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 IL10P22301 178 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 ITGA3P26006 1051 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 AHRP35869 848 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 BCL6P41182 706 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 CD97P48960 835 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 EMP2P54851 167 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 GPX6P59796 221 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 RAB10P61026 200 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 CSHL1Q14406 222 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 ZNF460Q14592 562 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 HERC3Q15034 1050 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms