RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PCDHGA2Q9Y5H1 932 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 CIB4A0PJX0 185 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 FABP12A6NFH5 140 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 ATP6V1G2-DDX39BF2Z307 99 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 GJB3O75712 270 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 FAM157BP0CG42 384 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 ATF4P18848 351 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 CRYBB2P43320 205 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 IDH2P48735 452 aaKnown RBP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 HMGCS1Q01581 520 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 PCDH1Q08174 1060 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 LARS2Q15031 903 aaKnown RBP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 PCBP2Q15366 365 aaKnown RBP eCLIP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 GRIK4Q16099 956 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 USP39Q53GS9 565 aaKnown RBP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 MARC1Q5VT66 337 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 DOK6Q6PKX4 331 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 PLET1Q6UQ28 207 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 CBLL1Q75N03 491 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 EIF3MQ7L2H7 374 aaKnown RBP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 MILR1Q7Z6M3 343 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 ANKRD46Q86W74 232 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 ZZZ3Q8IYH5 903 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 TMEM132CQ8N3T6 1108 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 CAMKK1Q8N5S9 505 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 RTL3Q8N8U3 475 aaKnown RBP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 SIDT2Q8NBJ9 832 aaKnown RBP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 CDKN2AIPNLQ96HQ2 116 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 METTL2AQ96IZ6 378 aaKnown RBP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 MAGEB10Q96LZ2 347 aaPredicted RBP9.1□□□□□ -0.95
NECAP1-201ENST00000339754 CCM2Q9BSQ5 444 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 SPATC1LQ9H0A9 340 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 LIN7BQ9HAP6 207 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 ING3Q9NXR8 418 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 ZNF451Q9Y4E5 1061 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 KCNE2Q9Y6J6 123 aa9.1□□□□□ -0.95
NECAP1-201ENST00000339754 A0A0G2JLL6 359 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 MYBPHLA2RUH7 354 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PDE9AO76083 593 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 WDR47O94967 919 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 KCNK5O95279 499 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PIRTP0C851 137 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 TNNI3P19429 210 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PIK3CGP48736 1102 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 COL4A4P53420 1690 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PER3P56645 1201 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 GTF2H2Q13888 395 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ZNF648Q5T619 568 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 GTF2H2CQ6P1K8 395 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ANKS3Q6ZW76 656 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 TSEN54Q7Z6J9 526 aaKnown RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PRRT2Q7Z6L0 340 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 SERPINA11Q86U17 422 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 DUSP18Q8NEJ0 188 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ENKURQ8TC29 256 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ZC3HAV1LQ96H79 300 aaKnown RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PCED1BQ96HM7 432 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 MSLNLQ96KJ4 702 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 SENP8Q96LD8 212 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 GPR137Q96N19 417 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 SPATA9Q9BWV2 254 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 EXOSC4Q9NPD3 245 aaKnown RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 RPS6KA6Q9UK32 745 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 WASHC1A8K0Z3 465 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 A8MUA0 341 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ZNF670-ZNF695F2Z2N8 137 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 I3L521 148 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 M0R129 80 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 RGS14O43566 566 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 OR1I1O60431 355 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 CYP17A1P05093 508 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 SCG5P05408 212 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 HAPLN1P10915 354 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 BCKDHAP12694 445 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PRKACAP17612 351 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ITGB7P26010 798 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 HTR7P34969 479 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ATN1P54259 1190 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 RRAS2P62070 204 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ALDH6A1Q02252 535 aaKnown RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 MAD2L1Q13257 205 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 MAB21L1Q13394 359 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PTPRNQ16849 979 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 VMACQ2NL98 169 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PDZK1Q5T2W1 519 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PDE12Q6L8Q7 609 aaKnown RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 TEX261Q6UWH6 196 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ZNF782Q6ZMW2 699 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 GET4Q7L5D6 327 aaPredicted RBP9.09□□□□□ -0.95
NECAP1-201ENST00000339754 FAM217AQ8IXS0 508 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ZNF680Q8NEM1 530 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 CREB3L4Q8TEY5 395 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ABHD16BQ9H3Z7 469 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 IPPKQ9H8X2 491 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 RLIMQ9NVW2 624 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 MCUBQ9NWR8 336 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 ASIC5Q9NY37 505 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 PCDHGB3Q9Y5G1 929 aa9.09□□□□□ -0.95
NECAP1-201ENST00000339754 U3KQ87 197 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms