RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 BTBD3Q9Y2F9 522 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 HCN4Q9Y3Q4 1203 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 PTGDR2Q9Y5Y4 395 aa13.94□□□□□ -0.18
NIPAL3-202ENST00000339255 GOLGA8QA0A0J9YX86 632 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 ATP6AP2A0A1C7CYW4 349 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 GOLGA8OA6NCC3 632 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 PROB1E7EW31 1015 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 GOLGA8NF8WBI6 632 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 TOX3O15405 576 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 B4GAT1O43505 415 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 CLEC3AO75596 197 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 ATP6AP2O75787 350 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 LDOC1O95751 146 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 C9P02748 559 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 GP1BAP07359 652 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 CD1CP29017 333 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 PPP1CAP62136 330 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 SF3A3Q12874 501 aaKnown RBP eCLIP13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 MAD2L1Q13257 205 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 NR6A1Q15406 480 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 LSM12Q3MHD2 195 aaKnown RBP13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 AASDHQ4L235 1098 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 NXNQ6DKJ4 435 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 LARP4Q71RC2 724 aaKnown RBP eCLIP13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 Q8N9G6 341 aaPredicted RBP13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 TRPV3Q8NET8 790 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 RHBDD1Q8TEB9 315 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 CMTM7Q96FZ5 175 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 CNDP2Q96KP4 475 aaKnown RBP13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 C3orf30Q96M34 536 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 OR52B2Q96RD2 323 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 HBEGFQ99075 208 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 SERPINI1Q99574 410 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 ACPTQ9BZG2 426 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 SPNS1Q9H2V7 528 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 AKTIPQ9H8T0 292 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 VPS29Q9UBQ0 182 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 ZFP69BQ9UJL9 534 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 CCL27Q9Y4X3 112 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 PCDHGA4Q9Y5G9 962 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 AP1M2Q9Y6Q5 423 aa13.93□□□□□ -0.18
NIPAL3-202ENST00000339255 FAM186AA6NE01 2351 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 FEZF1A0PJY2 475 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 MAGEB17A8MXT2 336 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 DLL1O00548 723 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 HAT1O14929 419 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 LSM1O15116 133 aaKnown RBP13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 CCDC22O60826 627 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 ZBTB11O95625 1053 aaPredicted RBP13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 CPNE6O95741 557 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 PRR35P0CG20 571 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 CD59P13987 128 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 PCSK2P16519 638 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 LBPP18428 481 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 ACP1P24666 158 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 PTX3P26022 381 aaPredicted RBP13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 NEK2P51955 445 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 TUBB3Q13509 450 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 AMZ1Q400G9 498 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 SCIMPQ6UWF3 145 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 Q6ZSR9 355 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 RNF44Q7L0R7 432 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 KMT5CQ86Y97 462 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 FAM20CQ8IXL6 584 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 PARP9Q8IXQ6 854 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 C19orf47Q8N9M1 422 aaKnown RBP13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 ANKRD53Q8N9V6 530 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 MFSD9Q8NBP5 474 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 WDR48Q8TAF3 677 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 IFI44Q8TCB0 444 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 TCTN2Q96GX1 697 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 PRR11Q96HE9 360 aaPredicted RBP13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 TGM7Q96PF1 710 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 TRAPPC9Q96Q05 1148 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 LRRC37BQ96QE4 947 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 ZFYVE21Q9BQ24 234 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 CCDC3Q9BQI4 270 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 CENPKQ9BS16 269 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 PRM3Q9NNZ6 103 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 C1orf109Q9NX04 203 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 HEY2Q9UBP5 337 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 PILRAQ9UKJ1 303 aa13.92□□□□□ -0.18
NIPAL3-202ENST00000339255 E9PBE3 544 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 KLHL41O60662 606 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 SEMA3DO95025 777 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 SERPINA6P08185 405 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 MYF5P13349 255 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 ACPPP15309 386 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 CSF2RBP32927 897 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 BCL6P41182 706 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 LSSP48449 732 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 ERVK-8P63133 956 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 CUL3Q13618 768 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 ZC3H12BQ5HYM0 836 aaKnown RBP13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 SPDYAQ5MJ70 313 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 PERM1Q5SV97 790 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 NKAIN2Q5VXU1 208 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 FCRL6Q6DN72 434 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 FAM92BQ6ZTR7 304 aa13.91□□□□□ -0.18
NIPAL3-202ENST00000339255 PRSS42Q7Z5A4 293 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms