RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 NCSTNQ92542 709 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 ZUFSPQ96AP4 578 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 PRAP1Q96NZ9 151 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 FEVQ99581 238 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 TBX5Q99593 518 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 CNPPD1Q9BV87 410 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 ZDHHC3Q9NYG2 299 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 TAC3Q9UHF0 121 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 GPSM3Q9Y4H4 160 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 PCDHGA11Q9Y5H2 935 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 PCDHA9Q9Y5H5 950 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 TNS1Q9HBL0 1735 aaKnown RBP7.96□□□□□ -1.13
HPS4-201ENST00000336873 TRIOBPQ9H2D6 2365 aa7.96□□□□□ -1.13
HPS4-201ENST00000336873 OR1F1O43749 312 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 SLC28A2O43868 658 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 BCHEP06276 602 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 STSP08842 583 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 HOXD8P13378 290 aaPredicted RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 SDC1P18827 310 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 PSMD8P48556 350 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 RAB8AP61006 207 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 RING1Q06587 406 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 SPCS2Q15005 226 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 SPANXN2Q5MJ10 180 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 ARMC4Q5T2S8 1044 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 DUS1LQ6P1R4 473 aaKnown RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 TMEM53Q6P2H8 277 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 C22orf39Q6P5X5 142 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 CASP12Q6UXS9 341 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 CEP68Q76N32 757 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 BTLAQ7Z6A9 289 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 ANKFN1Q8N957 763 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 OR10G6Q8NH81 332 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 PLD4Q96BZ4 506 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 PAWRQ96IZ0 340 aaKnown RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 SLC35A5Q9BS91 424 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 TVP23BQ9NYZ1 205 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 DNAJC27Q9NZQ0 273 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 ITGB1BP2Q9UKP3 347 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 PSME2Q9UL46 239 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 SCN2AQ99250 2005 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 EFCAB10A6NFE3 127 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 DRGXA6NNA5 263 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 WASHC1A8K0Z3 465 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 ZNF99A8MXY4 864 aaPredicted RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 EFCAB9A8MZ26 197 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 KPNA4O00629 521 aaPredicted RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 TGM5O43548 720 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 TULP3O75386 442 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 FCER2P06734 321 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 SRCP12931 536 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 HPCAL1P37235 193 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 RPP38P78345 283 aaKnown RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 VLDLRP98155 873 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 TMEM115Q12893 351 aaPredicted RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 LEXMQ3ZCV2 418 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 SLC36A3Q495N2 470 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 WASH2PQ6VEQ5 465 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 GDPD4Q6W3E5 623 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 GAREM2Q75VX8 874 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 ZNF551Q7Z340 670 aaPredicted RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 C10orf111Q8N326 155 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 ZNF296Q8WUU4 475 aaPredicted RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 PIH1D2Q8WWB5 315 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 NLNQ9BYT8 704 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 RNF167Q9H6Y7 350 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 KLHL1Q9NR64 748 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 SNTG1Q9NSN8 517 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 GPR83Q9NYM4 423 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 RPS6KA6Q9UK32 745 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 KCNK6Q9Y257 313 aa7.96□□□□□ -1.14
HPS4-201ENST00000336873 CAB39Q9Y376 341 aaPredicted RBP7.96□□□□□ -1.14
HPS4-201ENST00000336873 ASPDHA6ND91 283 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ISM1B1AKI9 464 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 CLDN25C9JDP6 229 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SLC1A7O00341 560 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 TAPBPO15533 448 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ACP5P13686 325 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 KDELR2P33947 212 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 RYKP34925 604 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SLC26A3P40879 764 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SLC19A1P41440 591 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 MAGEA11P43364 429 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 RXRGP48443 463 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 CLCN7P51798 805 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 TXNL4AP83876 142 aaKnown RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 CAP1Q01518 475 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ID2Q02363 134 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 CD300CQ08708 224 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 NFE2L1Q14494 772 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 NKG7Q16617 165 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 CARD16Q5EG05 197 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 RPS26P11Q5JNZ5 115 aaPredicted RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 NEK5Q6P3R8 708 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 EIF3MQ7L2H7 374 aaKnown RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 SHFQ7M4L6 423 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 TMEM179BQ7Z7N9 219 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SLC22A16Q86VW1 577 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 MMP21Q8N119 569 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 LGI4Q8N135 537 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms