RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 PCDH17O14917 1159 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 FLRT2O43155 660 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 CDK14O94921 469 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 C4BPAP04003 597 aaKnown RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 CCND3P30281 292 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 RORAP35398 523 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PLA2G16P53816 162 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 NBPF12Q5TAG4 269 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 FAM198BQ6UWH4 519 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 ZC3HC1Q86WB0 502 aaKnown RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 TMEM151AQ8N4L1 468 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 MARVELD2Q8N4S9 558 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 NAT8LQ8N9F0 302 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 STK35Q8TDR2 534 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 COPS5Q92905 334 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 HYLS1Q96M11 299 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 CDH10Q9Y6N8 788 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 M0R129 80 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PCSK2P16519 638 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PRPS1L1P21108 318 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 OAZ1P54368 228 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 ARSFP54793 590 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 CDK10Q15131 360 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PON3Q15166 354 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PCBP2Q15366 365 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 RABL3Q5HYI8 236 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PLPP4Q5VZY2 271 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 EEF1DP3Q658K8 133 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF709Q8N972 641 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 OR5T2Q8NGG2 359 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 OR9I1Q8NGQ6 314 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 BTN2A3PQ96KV6 586 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 MRPL15Q9P015 296 aaKnown RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 OIP5O43482 229 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 CSTBP04080 98 aaKnown RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 HTR1AP08908 422 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PABPC4LP0CB38 370 aaKnown RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 SLC6A9P48067 706 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 CREMQ03060 361 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 SSX2Q16385 188 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 ELP2Q6IA86 826 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 JSRP1Q96MG2 331 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-201ENST00000334504 SLC6A7Q99884 636 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 TTYH3Q9C0H2 523 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 ASF1BQ9NVP2 202 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 FAM53CQ9NYF3 392 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 RHCGQ9UBD6 479 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 PCDHGA11Q9Y5H2 935 aa9.54□□□□□ -0.88
COL4A6-201ENST00000334504 H0YAE9 185 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 KIAA0513O60268 411 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CILPO75339 1184 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 RBMXP38159 391 aaKnown RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ZNF616Q08AN1 781 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 NDUFA9Q16795 377 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 DEFB115Q30KQ5 88 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 SPATC1Q76KD6 591 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 TMEM199Q8N511 208 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ESX1Q8N693 406 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 TCEANCQ8N8B7 351 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 OR5T1Q8NG75 326 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 OR10T2Q8NGX3 314 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 FZD10Q9ULW2 581 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 UNC13BO14795 1591 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 TECPR2O15040 1411 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 TLX3O43711 291 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CLDN11O75508 207 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 RASAL1O95294 804 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CYP17A1P05093 508 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ITGA5P08648 1049 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 BCKDHAP12694 445 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ALAS2P22557 587 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ST3GAL4Q11206 333 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 MON1AQ86VX9 555 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 BEST3Q8N1M1 668 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 BEND7Q8N7W2 519 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 NAXEQ8NCW5 288 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ZUFSPQ96AP4 578 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CNTNAP3BQ96NU0 1288 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 SYT4Q9H2B2 425 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 GLS2Q9UI32 602 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ZFR2Q9UPR6 939 aaKnown RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 UBIAD1Q9Y5Z9 338 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 CPS1P31327 1500 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ABCA6Q8N139 1617 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 NEDD8-MDP1E9PL57 170 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 MT-ND5P03915 603 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 HCKP08631 526 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ADORA2AP29274 412 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 TAS2R43P59537 309 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 HERV-K104P61576 105 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 DYRK1AQ13627 763 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 INTS6LQ5JSJ4 861 aaKnown RBP9.53□□□□□ -0.88
COL4A6-201ENST00000334504 DCDC5Q6ZRR9 648 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ARL14Q8N4G2 192 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 OR8K3Q8NH51 312 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ARHGAP9Q9BRR9 750 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 BTBD1Q9H0C5 482 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ADAMTS10Q9H324 1103 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 ASAH2Q9NR71 780 aa9.53□□□□□ -0.88
COL4A6-201ENST00000334504 PCDHGC4Q9Y5F7 938 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms