RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ABCD2Q9UBJ2 740 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 PCDHGA9Q9Y5G4 932 aaKnown RBP11.51□□□□□ -0.57
LIMK2-202ENST00000333611 SESN1Q9Y6P5 492 aa11.51□□□□□ -0.57
LIMK2-202ENST00000333611 LOC102723532A0A0G2JNH3 316 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 GJA5P36382 358 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 NUP62P37198 522 aaPredicted RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 GZMKP49863 264 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 ISL1P61371 349 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 TWF1Q12792 350 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 GPR50Q13585 617 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 GHDCQ8N2G8 530 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 ATAD1Q8NBU5 361 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 FANK1Q8TC84 345 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 OTULINQ96BN8 352 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 KCNC2Q96PR1 638 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 LRRC3Q9BY71 257 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CHIAQ9BZP6 476 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 OSER1Q9NX31 292 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 ZNF490Q9ULM2 529 aaPredicted RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 ING4Q9UNL4 249 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 PLCL2Q9UPR0 1127 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 LTBP3Q9NS15 1303 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 ZNF98A6NK75 572 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 MUSKO15146 869 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 FABP7O15540 132 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 SSX5O60225 188 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 SH3BGRLO75368 114 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 LRATO95237 230 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 POU2F1P14859 743 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 EFNA1P20827 205 aaPredicted RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 PCMT1P22061 227 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 TIE1P35590 1138 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 FAM174BQ3ZCQ3 159 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 RAB41Q5JT25 222 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 DDI2Q5TDH0 399 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 NADSYN1Q6IA69 706 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CXCL17Q6UXB2 119 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 SCD5Q86SK9 330 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 LINC00518Q8N0U6 118 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 PGBD5Q8N414 524 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 OR56A4Q8NGH8 313 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 PGAP3Q96FM1 320 aaPredicted RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CDKN2AIPNLQ96HQ2 116 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 OR2A14Q96R47 310 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 ATOH8Q96SQ7 321 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 PARK7Q99497 189 aaKnown RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 POLR1EQ9GZS1 481 aaKnown RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 RANBP3Q9H6Z4 567 aaPredicted RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 TLR9Q9NR96 1032 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 AIG1Q9NVV5 245 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 OSGIN1Q9UJX0 560 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 A0A0D9SEW6 157 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 SHOXO15266 292 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 SGTAO43765 313 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 BNIP3LO60238 219 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 RPP40O75818 363 aaKnown RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 SERPINF2P08697 491 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 FDXRP22570 491 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 DNAJB1P25685 340 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CD52P31358 61 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 TALDO1P37837 337 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CRYBB1P53674 252 aaPredicted RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CRISP3P54108 245 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 RPS7P62081 194 aaKnown RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CTAG1AP78358 180 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CDC42EP1Q00587 391 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 MVKQ03426 396 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CCL14Q16627 93 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 FBXL22Q6P050 247 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 PRSS42Q7Z5A4 293 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 ABI3BPQ7Z7G0 1075 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 TMC8Q8IU68 726 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 LRRC17Q8N6Y2 441 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 TMEM80Q96HE8 168 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 TPD52L3Q96J77 140 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 SEPT5Q99719 369 aaPredicted RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 WACQ9BTA9 647 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 GTPBP2Q9BX10 602 aaKnown RBP11.5□□□□□ -0.57
LIMK2-202ENST00000333611 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.5□□□□□ -0.576e-7■■■□□ 15.3
LIMK2-202ENST00000333611 GHITMQ9H3K2 345 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 GPR83Q9NYM4 423 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 NKIRAS2Q9NYR9 191 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 DNAJB9Q9UBS3 223 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 ENOPH1Q9UHY7 261 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 FKBPLQ9UIM3 349 aa11.5□□□□□ -0.57
LIMK2-202ENST00000333611 WASHC1A8K0Z3 465 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 VPS26AO75436 327 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 GRK5P34947 590 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 HNF1BP35680 557 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 AKIRIN2Q53H80 203 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 PLCZ1Q86YW0 608 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 TTC9BQ8N6N2 239 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 GTF3C2Q8WUA4 911 aaPredicted RBP11.49□□□□□ -0.57
LIMK2-202ENST00000333611 YIPF6Q96EC8 236 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 RTP3Q9BQQ7 232 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 AARSD1Q9BTE6 412 aaKnown RBP11.49□□□□□ -0.57
LIMK2-202ENST00000333611 TTPALQ9BTX7 342 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 ZNF768Q9H5H4 540 aaKnown RBP11.49□□□□□ -0.57
LIMK2-202ENST00000333611 SMURF1Q9HCE7 757 aa11.49□□□□□ -0.57
LIMK2-202ENST00000333611 SAMHD1Q9Y3Z3 626 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms