RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 GPX2P18283 190 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 EPORP19235 508 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 POLR2EP19388 210 aaKnown RBP13.96□□□□□ -0.17
SNX20-202ENST00000330943 TNFRSF1BP20333 461 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 CTGFP29279 349 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 HOXC8P31273 242 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 DDOSTP39656 456 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 KCNJ10P78508 379 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 ZMAT1Q5H9K5 638 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 TTC23LQ6PF05 361 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 FAM9CQ8IZT9 166 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 RNF175Q8N4F7 328 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 ST13P5Q8NFI4 369 aaPredicted RBP13.96□□□□□ -0.17
SNX20-202ENST00000330943 PARK7Q99497 189 aaKnown RBP13.96□□□□□ -0.17
SNX20-202ENST00000330943 CCM2Q9BSQ5 444 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 ASB8Q9H765 288 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 SMURF1Q9HCE7 757 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 MS4A12Q9NXJ0 267 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 DUSP12Q9UNI6 340 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 PCDHB5Q9Y5E4 795 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 CHD5Q8TDI0 1954 aa13.96□□□□□ -0.17
SNX20-202ENST00000330943 SUV39H1O43463 412 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 ZNF865P0CJ78 1059 aaPredicted RBP13.96□□□□□ -0.18
SNX20-202ENST00000330943 MAPK1P28482 360 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 TIE1P35590 1138 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 PURAQ00577 322 aaKnown RBP13.96□□□□□ -0.18
SNX20-202ENST00000330943 SLAMF1Q13291 335 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 PPIGQ13427 754 aaKnown RBP eCLIP13.96□□□□□ -0.18
SNX20-202ENST00000330943 E2F2Q14209 437 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 IRF3Q14653 427 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 NFE2Q16621 373 aaPredicted RBP13.96□□□□□ -0.18
SNX20-202ENST00000330943 NEK5Q6P3R8 708 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 CERS6Q6ZMG9 384 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 RBFAQ8N0V3 343 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 B3GNT7Q8NFL0 401 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 OR10G2Q8NGC3 310 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 MAL2Q969L2 176 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 FUBP3Q96I24 572 aaKnown RBP eCLIP13.96□□□□□ -0.18
SNX20-202ENST00000330943 MGLLQ99685 303 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 EXOSC4Q9NPD3 245 aaKnown RBP13.96□□□□□ -0.18
SNX20-202ENST00000330943 MAU2Q9Y6X3 613 aa13.96□□□□□ -0.18
SNX20-202ENST00000330943 PLK4O00444 970 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 ARHGAP33O14559 1287 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 CA12O43570 354 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 ALX3O95076 343 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 RHOCP08134 193 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 HNF4AP41235 474 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 RFX2P48378 723 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 CRYBA2P53672 197 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 RING1Q06587 406 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 FOXD4Q12950 439 aaPredicted RBP13.95□□□□□ -0.18
SNX20-202ENST00000330943 FAM110CQ1W6H9 321 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 SYT12Q8IV01 421 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 UROC1Q96N76 676 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 ADAM2Q99965 735 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 DYRK4Q9NR20 520 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 ARL15Q9NXU5 204 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 CRNNQ9UBG3 495 aaPredicted RBP13.95□□□□□ -0.18
SNX20-202ENST00000330943 MUTYHQ9UIF7 546 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 SLC6A14Q9UN76 642 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 ZNF623O75123 536 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 COX7A2P14406 83 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 TAB1Q15750 504 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 UGT8Q16880 541 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 TIMM50Q3ZCQ8 353 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 ZNF367Q7RTV3 350 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 SIMC1Q8NDZ2 872 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 FLCNQ8NFG4 579 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 GPR151Q8TDV0 419 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 CMTM7Q96FZ5 175 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 CRELD1Q96HD1 420 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 NIPSNAP1Q9BPW8 284 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 BBS2Q9BXC9 721 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 PCDHGA2Q9Y5H1 932 aa13.95□□□□□ -0.18
SNX20-202ENST00000330943 MEIOCA2RUB1 952 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 CCRL2O00421 344 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 ACSL4O60488 711 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 OPN1SWP03999 348 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 ANXA5P08758 320 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 CHRNEQ04844 493 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 TRIM60Q495X7 471 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 ZNF648Q5T619 568 aaPredicted RBP13.94□□□□□ -0.18
SNX20-202ENST00000330943 GDF6Q6KF10 455 aaPredicted RBP13.94□□□□□ -0.18
SNX20-202ENST00000330943 NOXRED1Q6NXP6 359 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 SETD6Q8TBK2 473 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 CNPPD1Q9BV87 410 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 SLC32A1Q9H598 525 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 TPT1P8Q9HAU6 139 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 TRAPPC4Q9Y296 219 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 PRG3Q9Y2Y8 225 aaPredicted RBP13.94□□□□□ -0.18
SNX20-202ENST00000330943 CFAP20Q9Y6A4 193 aaKnown RBP13.94□□□□□ -0.18
SNX20-202ENST00000330943 PIKFYVEQ9Y2I7 2098 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 USP34Q70CQ2 3546 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 A0A0U1RQF3 1178 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 EFCAB10A6NFE3 127 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.94□□□□□ -0.18
SNX20-202ENST00000330943 AGRPO00253 132 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 ADRA2AP08913 450 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 POU2F1P14859 743 aa13.94□□□□□ -0.18
SNX20-202ENST00000330943 HMGCLP35914 325 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms