RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 IDSP22304 550 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 GSTM2P28161 218 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 TIA1P31483 386 aaKnown RBP eCLIP14.04□□□□□ -0.169e-11■■■■■ 30.9
TPM3-206ENST00000330188 EMP3P54852 163 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 VLDLRP98155 873 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 DCTN2Q13561 401 aaKnown RBP14.04□□□□□ -0.16
TPM3-206ENST00000330188 CATSPEREQ5SY80 951 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 CPTPQ5TA50 214 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 MED27Q6P2C8 311 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 EIF3MQ7L2H7 374 aaKnown RBP14.04□□□□□ -0.16
TPM3-206ENST00000330188 ARHGAP22Q7Z5H3 698 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 VTCN1Q7Z7D3 282 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 CYP4Z1Q86W10 505 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 CFAP206Q8IYR0 622 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 SPARTQ8N0X7 666 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 CELF5Q8N6W0 485 aaKnown RBP14.04□□□□□ -0.16
TPM3-206ENST00000330188 GPR156Q8NFN8 814 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 COQ8BQ96D53 544 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 OR2AG1Q9H205 316 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 TMEM9Q9P0T7 183 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 MRPS23Q9Y3D9 190 aaKnown RBP14.04□□□□□ -0.16
TPM3-206ENST00000330188 ORC6Q9Y5N6 252 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 MYO7AQ13402 2215 aa14.04□□□□□ -0.16
TPM3-206ENST00000330188 hCG_2039718K7EN88 272 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 TLL1O43897 1013 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 FABP3P05413 133 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 HLA-EP13747 358 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 NPPBP16860 134 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 IGFBP5P24593 272 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 ITGB7P26010 798 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 RYKP34925 604 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 HPCAL1P37235 193 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 PNLIPRP1P54315 467 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 TOP3AQ13472 1001 aaPredicted RBP14.03□□□□□ -0.16
TPM3-206ENST00000330188 IL18R1Q13478 541 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 VEZF1Q14119 521 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 LAPTM4AQ15012 233 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 CAPN13Q6MZZ7 669 aaPredicted RBP14.03□□□□□ -0.16
TPM3-206ENST00000330188 TRAPPC5Q8IUR0 188 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 NPAS3Q8IXF0 933 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 ETFBKMTQ8IXQ9 262 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 SYTL1Q8IYJ3 562 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 LMNTD1Q8N9Z9 388 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 SNX19Q92543 992 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 NUS1Q96E22 293 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 HSH2DQ96JZ2 352 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 SPATA9Q9BWV2 254 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 EXD2Q9NVH0 621 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 MAPRE3Q9UPY8 281 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 EXO1Q9UQ84 846 aaKnown RBP14.03□□□□□ -0.16
TPM3-206ENST00000330188 A0A1W2PPW3 197 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 BCKDKO14874 412 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 PCDH7O60245 1069 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 DIRAS1O95057 198 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 ADH1CP00326 375 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 STT3AP46977 705 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 DAPP51397 102 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 PPIGQ13427 754 aaKnown RBP eCLIP14.03□□□□□ -0.164e-7■□□□□ 9.5
TPM3-206ENST00000330188 GAB1Q13480 694 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 C9orf64Q5T6V5 341 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 ANXA8L1Q5VT79 327 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 RAET1GQ6H3X3 334 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 GALNT5Q7Z7M9 940 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 PIK3C3Q8NEB9 887 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 ZFP90Q8TF47 636 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 FBLIM1Q8WUP2 373 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 WDR34Q96EX3 536 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 SGPP1Q9BX95 441 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 ZCCHC2Q9C0B9 1178 aaKnown RBP14.03□□□□□ -0.16
TPM3-206ENST00000330188 LHPPQ9H008 270 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 PRM3Q9NNZ6 103 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 BLOC1S6Q9UL45 172 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 FZD4Q9ULV1 537 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 GMEB1Q9Y692 573 aa14.03□□□□□ -0.16
TPM3-206ENST00000330188 GNG14A0A1W2PPG7 69 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 MGAT4DA6NG13 374 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 SLC1A7O00341 560 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 PLK4O00444 970 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 NUDT7P0C024 238 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 C6P13671 934 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 FPR1P21462 350 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 DNAJA1P31689 397 aaKnown RBP14.02□□□□□ -0.16
TPM3-206ENST00000330188 GPR1P46091 355 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 SLC6A11P48066 632 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 RAPSNQ13702 412 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 TUBA3CQ13748 450 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 SLBPQ14493 270 aaKnown RBP eCLIP14.02□□□□□ -0.16
TPM3-206ENST00000330188 STARD3Q14849 445 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 FNDC3BQ53EP0 1204 aaKnown RBP14.02□□□□□ -0.16
TPM3-206ENST00000330188 ZNF385BQ569K4 471 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 FGD3Q5JSP0 725 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 TMEM240Q5SV17 173 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 KDM4DQ6B0I6 523 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 GTF2IRD2BQ6EKJ0 949 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 GALNT18Q6P9A2 607 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 ZNF765Q7L2R6 523 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 GTF2IRD2Q86UP8 949 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 TMIEQ8NEW7 156 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 VPS37AQ8NEZ2 397 aa14.02□□□□□ -0.16
TPM3-206ENST00000330188 OR9A1PQ8NGU1 263 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms