RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 RGCCQ9H4X1 137 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SRRDQ9UH36 339 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CYTH4Q9UIA0 394 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 BCL9O00512 1426 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PRRG1O14668 218 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RASGRP1O95267 797 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SNAPINO95295 136 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SLC25A27O95847 323 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 H2AFB2P0C5Z0 115 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 P2RX3P56373 397 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 WNT3AP56704 352 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 NPRL3Q12980 569 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 AIMP2Q13155 320 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 LAPTM5Q13571 262 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SLC27A1Q6PCB7 646 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CHDHQ8NE62 594 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 OR6Q1Q8NGQ2 317 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SEMA3CQ99985 751 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 ELAC1Q9H777 363 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RAD18Q9NS91 495 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 DTLQ9NZJ0 730 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 FREM1Q5H8C1 2179 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 C5orf51A6NDU8 294 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 H7C4K7 107 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PRODHO43272 600 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SORBS2O94875 1100 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 TFP02787 698 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SPARCP09486 303 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CTRB1P17538 263 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 ASPAP45381 313 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RFX3P48380 749 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 ST8SIA6P61647 398 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 GK3PQ14409 553 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CTRB2Q6GPI1 263 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 NCEH1Q6PIU2 408 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 GDPGP1Q6ZNW5 385 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SSX6Q7RTT6 188 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 METTL3Q86U44 580 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CARNMT1Q8N4J0 409 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 FAM98AQ8NCA5 519 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RIT1Q92963 219 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 TNFSF13BQ9Y275 285 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 A0A1W2PQL4 384 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 WASHC1A8K0Z3 465 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 A8MU76 341 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 EEF1E1O43324 174 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CNTN5O94779 1100 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PBLDP30039 288 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PSMA6P60900 246 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CNTN2Q02246 1040 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CILP2Q8IUL8 1156 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SCRN2Q96FV2 425 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 IL4I1Q96RQ9 567 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 EPYCQ99645 322 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 DMAC2Q9NW81 257 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 TMEM45AQ9NWC5 275 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 EIF2B4Q9UI10 523 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 FZD10Q9ULW2 581 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CNTNAP1P78357 1384 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PROS1P07225 676 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CYP2A6P11509 494 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RPS2P15880 293 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CD247P20963 164 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 IL1R2P27930 398 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RBMS1P29558 406 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PRR5P85299 388 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CHRNEQ04844 493 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 CACNG1Q06432 222 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 GPRC6AQ5T6X5 926 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 OR13F1Q8NGS4 319 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 FANK1Q8TC84 345 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 FAM151AQ8WW52 585 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 ACDQ96AP0 544 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SLC25A51Q9H1U9 297 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 BRD9Q9H8M2 597 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 IPPKQ9H8X2 491 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RNF121Q9H920 327 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PRDM5Q9NQX1 630 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 MGAT4BQ9UQ53 548 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PCDHGB7Q9Y5F8 929 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 DPYSL4O14531 572 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 TFAP2AP05549 437 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RAB3AP20336 220 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SKP1P63208 163 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 EIF4HQ15056 248 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SIX1Q15475 284 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 UGT8Q16880 541 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 MAP1SQ66K74 1059 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 TTLL6Q8N841 843 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 OR2L5Q8NG80 312 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 JOSD2Q8TAC2 188 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SNX33Q8WV41 574 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RANBP9Q96S59 729 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SORT1Q99523 831 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 FTHL17Q9BXU8 183 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 AMBNQ9NP70 447 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 FBXO8Q9NRD0 319 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 USP21Q9UK80 565 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 DERAQ9Y315 318 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 NUBP2Q9Y5Y2 271 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms