RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 GPR83Q9NYM4 423 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 IL17CQ9P0M4 197 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 ERVW-1Q9UQF0 538 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 SSC5DA1L4H1 1573 aa12.35□□□□□ -0.43
DNMT3A-202ENST00000321117 A0A1B0GTL3 188 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 AGAP5A6NIR3 686 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 MTX2O75431 263 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 GJB5O95377 273 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 SDC2P34741 201 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 HNRNPFP52597 415 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 ISL1P61371 349 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CDK6Q00534 326 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 FPGSQ05932 587 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 SNAPC1Q16533 368 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 ADPRMQ3LIE5 342 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CTSL3PQ5NE16 218 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 DESI1Q6ICB0 168 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 C2orf15Q8WU43 125 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 RHBDF1Q96CC6 855 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 QRFPRQ96P65 431 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 POLR2J3Q9H1A7 115 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 ANKRA2Q9H9E1 313 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 TIGARQ9NQ88 270 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 MRPL17Q9NRX2 175 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 ABCG2Q9UNQ0 655 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 HCN4Q9Y3Q4 1203 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 RPL36Q9Y3U8 105 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 H3BM21 787 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 COQ9O75208 318 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 YES1P07947 543 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 MMP2P08253 660 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 PPP2R2BQ00005 443 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CREMQ03060 361 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 PPIGQ13427 754 aaKnown RBP eCLIP12.34□□□□□ -0.433e-8■■□□□ 13.2
DNMT3A-202ENST00000321117 IL18Q14116 193 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CDC73Q6P1J9 531 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 MRPL10Q7Z7H8 261 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 ASCC1Q8N9N2 400 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 OR5AK3PQ8NH89 298 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 NFKBIDQ8NI38 313 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 GANCQ8TET4 914 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 PKP4Q99569 1192 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CLMPQ9H6B4 373 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 TVP23BQ9NYZ1 205 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 PCDHGB6Q9Y5F9 930 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 TRBC2A0A5B9 178 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 A8MU76 341 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 TLR4O00206 839 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 SLC16A6O15403 523 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 PLOD3O60568 738 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 SERPINI2O75830 405 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 OAZ2O95190 189 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 FKBP1BP68106 108 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CTU2Q2VPK5 515 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 USP51Q70EK9 711 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 TEX47Q8TBZ9 253 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 RTP3Q9BQQ7 232 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 RAD18Q9NS91 495 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 ERVK13-1Q9NX77 482 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 PTGFRNQ9P2B2 879 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 NRXN2Q9P2S2 1712 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CLCA1A8K7I4 914 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 GKP32189 559 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 SREBF2Q12772 1141 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CRTC2Q53ET0 693 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 ZNF367Q7RTV3 350 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CLECL1Q8IZS7 167 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 ARL14EPQ8N8R7 260 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 YME1L1Q96TA2 773 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 DOK1Q99704 481 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 NEURL2Q9BR09 285 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CORO1BQ9BR76 489 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 SPRTNQ9H040 489 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 CLEC4MQ9H2X3 399 aaPredicted RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 KLHL1Q9NR64 748 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 THG1LQ9NWX6 298 aaKnown RBP12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 DLGAP4Q9Y2H0 992 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 PCDHB11Q9Y5F2 797 aa12.34□□□□□ -0.43
DNMT3A-202ENST00000321117 PRR23AA6NEV1 266 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 ATG13O75143 517 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 PSIP1O75475 530 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 IGLV3-25P01717 112 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF865P0CJ78 1059 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 ACRV1P26436 265 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 CD83Q01151 205 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 OXR1Q8N573 874 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 TMEM203Q969S6 136 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 OR2B2Q9GZK3 357 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 TAS2R9Q9NYW1 312 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 OR7A17O14581 309 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 TLL1O43897 1013 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 NME6O75414 186 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 CKBP12277 381 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 TCEA1P23193 301 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 FLT3LGP49771 235 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 HK3P52790 923 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 GP2P55259 537 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms