RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 HOXC11O43248 304 aaPredicted RBP19.86■□□□□ 0.77
TTC39C-202ENST00000317571 PFDN1O60925 122 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 HNRNPA1P09651 372 aaKnown RBP eCLIP19.86■□□□□ 0.77
TTC39C-202ENST00000317571 HSD3B1P14060 373 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 HSD3B2P26439 372 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 KDELR2P33947 212 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 KLHL35Q6PF15 583 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 SHQ1Q6PI26 577 aaKnown RBP19.86■□□□□ 0.77
TTC39C-202ENST00000317571 SYNPOQ8N3V7 929 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 ARL10Q8N8L6 244 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 HDAC2Q92769 488 aaKnown RBP19.86■□□□□ 0.77
TTC39C-202ENST00000317571 HSPBAP1Q96EW2 488 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 NRTNQ99748 197 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 ZDHHC4Q9NPG8 344 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 SLC27A6Q9Y2P4 619 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 PCDHB11Q9Y5F2 797 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 A0A1W2PPW3 197 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 TMEM229AB2RXF0 380 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 PSMD11O00231 422 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 FOXD2O60548 495 aaPredicted RBP19.86■□□□□ 0.77
TTC39C-202ENST00000317571 KLHL18O94889 574 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 GBAP04062 536 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 MYOGP15173 224 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 ENTPD1P49961 510 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 IQCCQ4KMZ1 466 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 BCL7AQ4VC05 210 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 ZNF691Q5VV52 312 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 GALNT5Q7Z7M9 940 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 TRAPPC5Q8IUR0 188 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 LRRC56Q8IYG6 542 aaPredicted RBP19.86■□□□□ 0.77
TTC39C-202ENST00000317571 MAL2Q969L2 176 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 AASSQ9UDR5 926 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 CDH7Q9ULB5 785 aa19.86■□□□□ 0.77
TTC39C-202ENST00000317571 TRIM64BA6NI03 449 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 SLC9A3R1O14745 358 aaPredicted RBP19.85■□□□□ 0.77
TTC39C-202ENST00000317571 MMP20O60882 483 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 C6P13671 934 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 JUNBP17275 347 aaPredicted RBP19.85■□□□□ 0.77
TTC39C-202ENST00000317571 DAPP51397 102 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 MEF2AQ02078 507 aaPredicted RBP19.85■□□□□ 0.77
TTC39C-202ENST00000317571 GTF2H3Q13889 308 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 FGD3Q5JSP0 725 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 LAIR1Q6GTX8 287 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 RTL10Q7L3V2 364 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 ARMCX6Q7L4S7 300 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 SPARTQ8N0X7 666 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 CELF5Q8N6W0 485 aaKnown RBP19.85■□□□□ 0.77
TTC39C-202ENST00000317571 ZNF555Q8NEP9 628 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 SNX19Q92543 992 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 HSH2DQ96JZ2 352 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 ABCB7O75027 752 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 PAPLNO95428 1278 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 ZNF8P17098 575 aaPredicted RBP19.85■□□□□ 0.77
TTC39C-202ENST00000317571 TIA1P31483 386 aaKnown RBP eCLIP19.85■□□□□ 0.77
TTC39C-202ENST00000317571 EPS8Q12929 822 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 TMED1Q13445 227 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 TSTA3Q13630 321 aaPredicted RBP19.85■□□□□ 0.77
TTC39C-202ENST00000317571 RAPSNQ13702 412 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 RBM48Q5RL73 367 aaKnown RBP19.85■□□□□ 0.77
TTC39C-202ENST00000317571 BROXQ5VW32 411 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 OR2T5Q6IEZ7 315 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 ZNF852Q6ZMS4 543 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 CBLL1Q75N03 491 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 HIPK1Q86Z02 1210 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 SYTL1Q8IYJ3 562 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 OR2T29Q8NH02 315 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 MYOCQ99972 504 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 LHPPQ9H008 270 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 GPATCH2Q9NW75 528 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 RHBDL2Q9NX52 303 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 C3orf18Q9UK00 162 aa19.85■□□□□ 0.77
TTC39C-202ENST00000317571 SAP18O00422 153 aaKnown RBP19.84■□□□□ 0.77
TTC39C-202ENST00000317571 MAGEB3O15480 346 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 GCM2O75603 506 aaPredicted RBP19.84■□□□□ 0.77
TTC39C-202ENST00000317571 SEC14L2O76054 403 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 PCSK2P16519 638 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 ST8SIA6P61647 398 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 COL4A3Q01955 1670 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 SLBPQ14493 270 aaKnown RBP eCLIP19.84■□□□□ 0.77
TTC39C-202ENST00000317571 CPTPQ5TA50 214 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 RAET1GQ6H3X3 334 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 FAM83HQ6ZRV2 1179 aaPredicted RBP19.84■□□□□ 0.77
TTC39C-202ENST00000317571 CAMKMTQ7Z624 323 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 CPA6Q8N4T0 437 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 ZNF420Q8TAQ5 688 aaPredicted RBP19.84■□□□□ 0.77
TTC39C-202ENST00000317571 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.84■□□□□ 0.77
TTC39C-202ENST00000317571 WFIKKN2Q8TEU8 576 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 ZFP90Q8TF47 636 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 NUS1Q96E22 293 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 FOPNLQ96NB1 174 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 GABARAPL1Q9H0R8 117 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 EPHX3Q9H6B9 360 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 FZD4Q9ULV1 537 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 KCNE2Q9Y6J6 123 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 SLC16A6O15403 523 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 ITGB7P26010 798 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 CASP9P55211 416 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 NFE2L1Q14494 772 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 STARD3Q14849 445 aa19.84■□□□□ 0.77
TTC39C-202ENST00000317571 PRSS53Q2L4Q9 553 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms