RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MAGEH1Q9H213 219 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 GBA3Q9H227 469 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 CCDC86Q9H6F5 360 aaKnown RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 ASF1AQ9Y294 204 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 ZNF451Q9Y4E5 1061 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 FAM234BA2RU67 622 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 H3BNH8 94 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 TMEM189-UBE2V1I3L0A0 370 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 SLITRK5O94991 958 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 RHOQP17081 205 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 RPL35P42766 123 aaKnown RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 GPD2P43304 727 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 OR3A3P47888 321 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 OR3A2P47893 321 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 XKP51811 444 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 UPP1Q16831 310 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 AADACL4Q5VUY2 407 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 TXNDC8Q6A555 127 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 STRADAQ7RTN6 431 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 XYLT1Q86Y38 959 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 OR4K2Q8NGD2 314 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 ZNF420Q8TAQ5 688 aaPredicted RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 CNDP2Q96KP4 475 aaKnown RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 FCRL2Q96LA5 508 aaPredicted RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 B3GNT4Q9C0J1 378 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 PLEKHA1Q9HB21 404 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 C1orf109Q9NX04 203 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 CNTN6Q9UQ52 1028 aa7.96□□□□□ -1.13
VPS41-202ENST00000310301 COLQQ9Y215 455 aaPredicted RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 RPH3AQ9Y2J0 694 aaPredicted RBP7.96□□□□□ -1.13
VPS41-202ENST00000310301 C13orf42A0A1B0GVH6 325 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 DISC1C4P0D8 188 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 TLR4O00206 839 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 TGFB1I1O43294 461 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 STK16O75716 305 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 AP2A1O95782 977 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 ADH1BP00325 375 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 GSTT2P0CG29 244 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 ANXA8P13928 327 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 PRKACBP22694 351 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 NUDT6P53370 316 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 IRF9Q00978 393 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 GBE1Q04446 702 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 TLR1Q15399 786 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 FAAH2Q6GMR7 532 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 ZCCHC12Q6PEW1 402 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 ZDHHC24Q6UX98 284 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 CAND1Q86VP6 1230 aaKnown RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 PIAS4Q8N2W9 510 aaPredicted RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 LRRC58Q96CX6 371 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 ZNF317Q96PQ6 595 aaPredicted RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 IL4I1Q96RQ9 567 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 TSNAXQ99598 290 aaKnown RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 TUBA1CQ9BQE3 449 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 SLC2A11Q9BYW1 496 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 LMAN1LQ9HAT1 526 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 EIF2B4Q9UI10 523 aaKnown RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 HCN2Q9UL51 889 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 PCDHGB3Q9Y5G1 929 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 IQCF5A8MTL0 148 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 KERAO60938 352 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 THEGLP0DJG4 465 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 CLCN4P51793 760 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 EEFSECP57772 596 aaKnown RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 HEPACAMQ14CZ8 416 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 ZMYND11Q15326 602 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 SLC25A52Q3SY17 297 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 C15orf39Q6ZRI6 1047 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 MON1BQ7L1V2 547 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 RAB11FIP2Q7L804 512 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 TMC8Q8IU68 726 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 CMTM8Q8IZV2 173 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 CREB3L1Q96BA8 519 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 IFT27Q9BW83 186 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 BRINP2Q9C0B6 783 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 POLR2J3Q9H1A7 115 aaKnown RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 CD93Q9NPY3 652 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 PTBP2Q9UKA9 531 aaKnown RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 SIT1Q9Y3P8 196 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 PCDHB1Q9Y5F3 818 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 ZNF831Q5JPB2 1677 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 CD48P09326 243 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 RAB5BP61020 215 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 RPS3AP61247 264 aaKnown RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 ECM1Q16610 540 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 ZNF181Q2M3W8 571 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 ADGRF1Q5T601 910 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 PARGQ86W56 976 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 PHYKPLQ8IUZ5 450 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 RAVER1Q8IY67 606 aaKnown RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 C2orf73Q8N5S3 287 aaPredicted RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 ENDOVQ8N8Q3 282 aaKnown RBP7.96□□□□□ -1.14
VPS41-202ENST00000310301 STRADBQ9C0K7 418 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 C1orf21Q9H246 121 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 EXO5Q9H790 373 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 MED31Q9Y3C7 131 aa7.96□□□□□ -1.14
VPS41-202ENST00000310301 A0A1W2PRQ8 180 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 SMIM30A4D0T7 59 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 APBB3O95704 486 aa7.95□□□□□ -1.14
VPS41-202ENST00000310301 C4BPAP04003 597 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms