RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TRPC1P48995 793 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 GRHL2Q6ISB3 625 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 ZZZ3Q8IYH5 903 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 SPARTQ8N0X7 666 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 NAGSQ8N159 534 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 DNAJB8Q8NHS0 232 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 SPPL3Q8TCT6 385 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 UBE2FQ969M7 185 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 DTNBP1Q96EV8 351 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 CRISPLD2Q9H0B8 497 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 REEP1Q9H902 201 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 TESMINQ9Y4I5 508 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 MAP4K5Q9Y4K4 846 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 GMPPBQ9Y5P6 360 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 SLC5A10A0PJK1 596 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 SCAMP2O15127 329 aaKnown RBP11.13□□□□□ -0.63
PTPN2-201ENST00000309660 MAGEB3O15480 346 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 SH3BP5O60239 455 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 ABCB7O75027 752 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 POP7O75817 140 aaKnown RBP11.13□□□□□ -0.63
PTPN2-201ENST00000309660 ACPPP15309 386 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 CCNA2P20248 432 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 HPCAL1P37235 193 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 RPS6KA3P51812 740 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 DCDC1P59894 354 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 EPS8Q12929 822 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 COL9A2Q14055 689 aaPredicted RBP11.13□□□□□ -0.63
PTPN2-201ENST00000309660 SMN1Q16637 294 aaKnown RBP11.13□□□□□ -0.63
PTPN2-201ENST00000309660 DPY19L1Q2PZI1 675 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 C11orf91Q3C1V1 193 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 TTC23LQ6PF05 361 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF852Q6ZMS4 543 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 NPAS3Q8IXF0 933 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 ZNF557Q8N988 423 aaPredicted RBP11.13□□□□□ -0.63
PTPN2-201ENST00000309660 SMG7Q92540 1137 aaKnown RBP11.13□□□□□ -0.63
PTPN2-201ENST00000309660 CIDECQ96AQ7 238 aaPredicted RBP11.13□□□□□ -0.63
PTPN2-201ENST00000309660 NUS1Q96E22 293 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 RHNO1Q9BSD3 238 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 FAM120CQ9NX05 1096 aaKnown RBP11.13□□□□□ -0.63
PTPN2-201ENST00000309660 RPS6KA6Q9UK32 745 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 SNX8Q9Y5X2 465 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 NUMA1Q14980 2115 aa11.13□□□□□ -0.63
PTPN2-201ENST00000309660 TBC1D3BA6NDS4 549 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 OTOL1A6NHN0 477 aaPredicted RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SLC1A7O00341 560 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SLC9A3R1O14745 358 aaPredicted RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 ARHGEF15O94989 841 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 C1orf105O95561 183 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 C6P13671 934 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 ETFAP13804 333 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 DDX6P26196 483 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 TTKP33981 857 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 PRIM2P49643 509 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 C2orf80Q0P641 193 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 TCEA2Q15560 299 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 RNF165Q6ZSG1 346 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 PTOV1Q86YD1 416 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SNRNP27Q8WVK2 155 aaKnown RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 EZH1Q92800 747 aaPredicted RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 NODALQ96S42 347 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SPNS1Q9H2V7 528 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 IL1RAPQ9NPH3 570 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 KRT84Q9NSB2 600 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SPATA6Q9NWH7 488 aaPredicted RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 GULP1Q9UBP9 304 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 TMEFF2Q9UIK5 374 aaPredicted RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 FBXO10Q9UK96 956 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 PCDHB11Q9Y5F2 797 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 ATG2BQ96BY7 2078 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 XIRP2A4UGR9 3374 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 CARNS1A5YM72 827 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SCAMP1O15126 338 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SCN2BO60939 215 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 INMTO95050 263 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 C6orf47O95873 294 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 KLK1P06870 262 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 ALDH9A1P49189 494 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 ANKDD1AQ495B1 522 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SZRD1Q7Z422 152 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SERPINA11Q86U17 422 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 GALNT13Q8IUC8 556 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 WDR48Q8TAF3 677 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 RSPRY1Q96DX4 576 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 DTD2Q96FN9 168 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 MAGIXQ9H6Y5 334 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 TRIM39Q9HCM9 518 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 AMBNQ9NP70 447 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 DEC1Q9P2X7 70 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SUV39H1O43463 412 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 ADH1CP00326 375 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 PRNPP04156 253 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SERPIND1P05546 499 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 DAPP51397 102 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 PLA2G16P53816 162 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 RAE1P78406 368 aaKnown RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 MTAPQ13126 283 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 KCNC3Q14003 757 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 SKIV2LQ15477 1246 aaKnown RBP11.12□□□□□ -0.63
PTPN2-201ENST00000309660 GPR153Q6NV75 609 aa11.12□□□□□ -0.63
PTPN2-201ENST00000309660 NEK10Q6ZWH5 1172 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms