RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 LRCH3Q96II8 777 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 ZNF223Q9UK11 482 aaPredicted RBP14.86□□□□□ -0.03
LEMD3-201ENST00000308330 STBD1O95210 358 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 C7P10643 843 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 RPL22P35268 128 aaKnown RBP14.86□□□□□ -0.03
LEMD3-201ENST00000308330 CDH4P55283 916 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 RGS1Q08116 209 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 UBXN2BQ14CS0 331 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 GRK1Q15835 563 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 REP15Q6BDI9 236 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 LINGO4Q6UY18 593 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 TAC4Q86UU9 113 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 SVBPQ8N300 66 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.86□□□□□ -0.03
LEMD3-201ENST00000308330 TEX19Q8NA77 164 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 SPPL2AQ8TCT8 520 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 CCDC106Q9BWC9 280 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 CMAHPQ9Y471 501 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 A0A075B6Q4 140 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 hCG_1818297A0A087WSY0 165 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 H0YAE9 185 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 ZBTB14O43829 449 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 CATP04040 527 aaKnown RBP14.86□□□□□ -0.03
LEMD3-201ENST00000308330 CBR1P16152 277 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 NRIP1P48552 1158 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 WNT3AP56704 352 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 SPATC1Q76KD6 591 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 SLC22A9Q8IVM8 553 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 ZNF781Q8N8C0 355 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 OR10Z1Q8NGY1 313 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 DNTTIP1Q9H147 329 aa14.86□□□□□ -0.03
LEMD3-201ENST00000308330 GNG14A0A1W2PPG7 69 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 AMD1P17707 334 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 SPANXN3Q5MJ09 141 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 LRRC66Q68CR7 880 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ELP2Q6IA86 826 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 CHST9Q7L1S5 443 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 GPALPP1Q8IXQ4 340 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TLR9Q9NR96 1032 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 SH3BP4Q9P0V3 963 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 PTGFRNQ9P2B2 879 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 NDOR1Q9UHB4 597 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ENTPD4Q9Y227 616 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 SAMHD1Q9Y3Z3 626 aaKnown RBP14.85□□□□□ -0.03
LEMD3-201ENST00000308330 A0A1B0GVM2 712 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TCAF2A6NFQ2 919 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ZNF780AO75290 641 aaPredicted RBP14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TULP3O75386 442 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TBX18O95935 607 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 IQCF3P0C7M6 154 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 CYBAP13498 195 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 YBEYP58557 167 aaPredicted RBP14.85□□□□□ -0.03
LEMD3-201ENST00000308330 FAM189A2Q15884 450 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 BCL7AQ4VC05 210 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 STK40Q8N2I9 435 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 P2RY11Q96G91 374 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 CSPG4P5Q96PW8 444 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 OR2M4Q96R27 311 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ACOX2Q99424 681 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 GPR88Q9GZN0 384 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ARL6Q9H0F7 186 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 FAM124BQ9H5Z6 455 aaPredicted RBP14.85□□□□□ -0.03
LEMD3-201ENST00000308330 COQ4Q9Y3A0 265 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 LRCH4O75427 683 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 VNN2O95498 520 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 RPN2P04844 631 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ELFN1P0C7U0 828 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TSPAN8P19075 237 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 CD300CQ08708 224 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TRAM2Q15035 370 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 C17orf107Q6ZR85 190 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 DET1Q7L5Y6 550 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ZZZ3Q8IYH5 903 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ZNF655Q8N720 491 aaPredicted RBP14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ZNF516Q92618 1163 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 EPB41L4BQ9H329 900 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 DHRS7Q9Y394 339 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TP73O15350 636 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 NOBOXO60393 691 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 BMP4P12644 408 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 ALDH9A1P49189 494 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 INAVAQ3KP66 663 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 SLC39A5Q6ZMH5 540 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TSPAN33Q86UF1 283 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 CELF2-AS1Q8N7Q2 184 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 OR7D4Q8NG98 312 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 PRR11Q96HE9 360 aaPredicted RBP14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TMEM175Q9BSA9 504 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 GKN1Q9NS71 199 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 TAS2R7Q9NYW3 318 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 VSX1Q9NZR4 365 aaPredicted RBP14.85□□□□□ -0.03
LEMD3-201ENST00000308330 INVSQ9Y283 1065 aa14.85□□□□□ -0.03
LEMD3-201ENST00000308330 H3BN98 237 aa14.84□□□□□ -0.03
LEMD3-201ENST00000308330 LIASO43766 372 aa14.84□□□□□ -0.03
LEMD3-201ENST00000308330 RHOQP17081 205 aa14.84□□□□□ -0.03
LEMD3-201ENST00000308330 SH3RF2Q8TEC5 729 aa14.84□□□□□ -0.03
LEMD3-201ENST00000308330 C12orf66Q96MD2 445 aa14.84□□□□□ -0.03
LEMD3-201ENST00000308330 ZIC5Q96T25 663 aa14.84□□□□□ -0.03
LEMD3-201ENST00000308330 BCLAF3A2AJT9 711 aaKnown RBP14.84□□□□□ -0.03
LEMD3-201ENST00000308330 AP3S2P59780 193 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms