RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 PCDHB10Q9UN67 800 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 POFUT2Q9Y2G5 429 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 SH3D21A4FU49 640 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 LRRC10BA6NIK2 292 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 WRBO00258 174 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 SHOX2O60902 331 aaPredicted RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 SIX3O95343 332 aaPredicted RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 MYCLP1P12525 358 aaPredicted RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 RING1Q06587 406 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 FIGLAQ6QHK4 219 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 ZYG11AQ6WRX3 759 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 TMPRSS11AQ6ZMR5 421 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 ZNF783Q6ZMS7 281 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 SYVN1Q86TM6 617 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 MFSD6LQ8IWD5 586 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 OR4N5Q8IXE1 308 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 COPG2Q9UBF2 871 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 ZNF282Q9UDV7 671 aaPredicted RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 MUTYHQ9UIF7 546 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 C3orf18Q9UK00 162 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 CAMK2AQ9UQM7 478 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 RBM47A0AV96 593 aaKnown RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 FKBP6O75344 327 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 SNUPNO95149 360 aaKnown RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 EGFP01133 1207 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 MT-ND5P03915 603 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 CBSLP0DN79 551 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 ZNF28P17035 718 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 GABRA3P34903 492 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 CBSP35520 551 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 XKP51811 444 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 LASP1Q14847 261 aaKnown RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 SF3B4Q15427 424 aaKnown RBP eCLIP6.9□□□□□ -1.3
RAG1-201ENST00000299440 SPIN4Q56A73 249 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 CLEC12AQ5QGZ9 265 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 AP1ARQ63HQ0 302 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 DNM1P34Q6PK57 102 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 ALYREFQ86V81 257 aaKnown RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 FIBINQ8TAL6 211 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 CEP295NLQ96MC4 621 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 P2RX2Q9UBL9 471 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 ATXN7L1Q9ULK2 861 aaPredicted RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 DNAJC25-GNG10A0A024R161 153 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 OR52A4PA6NMU1 304 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 FADS2P1A8MWK0 482 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 GRIA1P42261 906 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 FLYWCH1Q4VC44 716 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 LCN1P1Q5VSP4 162 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 FBXO42Q6P3S6 717 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 GPR65Q8IYL9 337 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 CCDC116Q8IYX3 515 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 SFXN2Q96NB2 322 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 CTRCQ99895 268 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 SLC29A3Q9BZD2 475 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 TRIM8Q9BZR9 551 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 LYARQ9NX58 379 aaKnown RBP6.9□□□□□ -1.31
RAG1-201ENST00000299440 ELOVL7A1L3X0 281 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 LCHNA4D1U4 455 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 AP2A2O94973 939 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 RAB25P57735 213 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 LSM3P62310 102 aaKnown RBP6.9□□□□□ -1.31
RAG1-201ENST00000299440 SHC2P98077 582 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 SPEM2Q0P670 501 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 ARL13AQ5H913 290 aaPredicted RBP6.9□□□□□ -1.31
RAG1-201ENST00000299440 TCTE1Q5JU00 501 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 GLYATQ6IB77 296 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 LINC00696Q6ZRV3 163 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 AMIGO2Q86SJ2 522 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 OR8K5Q8NH50 307 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 C12orf65Q9H3J6 166 aaKnown RBP6.9□□□□□ -1.31
RAG1-201ENST00000299440 IFT52Q9Y366 437 aa6.9□□□□□ -1.31
RAG1-201ENST00000299440 LOC730098B7Z3J9 87 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 MATN2O00339 956 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 AQP9O43315 295 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 OR1I1O60431 355 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 NRP2O60462 931 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 PSIP1O75475 530 aaKnown RBP6.89□□□□□ -1.31
RAG1-201ENST00000299440 AGR2O95994 175 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 TCF4P15884 667 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 GDF1P27539 372 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 CHN2P52757 468 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 IRF9Q00978 393 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 HERC3Q15034 1050 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 MAPK11Q15759 364 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 KIAA0319Q5VV43 1072 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 TSPAN33Q86UF1 283 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 NRROSQ86YC3 692 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 OR10A6Q8NH74 314 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 TMEM234Q8WY98 164 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 MYDGFQ969H8 173 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 TESCQ96BS2 214 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 NPY6RQ99463 290 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 SH3GL3Q99963 347 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 IL1RAPQ9NPH3 570 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 DLGAP2Q9P1A6 1054 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 NENFQ9UMX5 172 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 H3BNC9 293 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 TRIM38O00635 465 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 BIRC5O15392 142 aa6.89□□□□□ -1.31
RAG1-201ENST00000299440 BRINP1O60477 761 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms