RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 GSSP48637 474 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 MAP7Q14244 749 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 TCEA2Q15560 299 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 MPEG1Q2M385 716 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 VMACQ2NL98 169 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 FGD3Q5JSP0 725 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 CCNYL2Q5T2Q4 361 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 DUS1LQ6P1R4 473 aaKnown RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 NEK10Q6ZWH5 1172 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 DCP2Q8IU60 420 aaKnown RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 NPAS3Q8IXF0 933 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 NAGSQ8N159 534 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 CSGALNACT1Q8TDX6 532 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 FCRL1Q96LA6 429 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 WBP1LQ9NX94 342 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 DKK3Q9UBP4 350 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 TDRKHQ9Y2W6 561 aaKnown RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 CXorf51AA0A1B0GTR3 108 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 H0YIV9 168 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 RTCAO00442 366 aaKnown RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 SCAMP2O15127 329 aaKnown RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 GCM2O75603 506 aaPredicted RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 IDSP22304 550 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 PSMB5P28074 263 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 IL12RB1P42701 662 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 CYP4F2P78329 520 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 TAP2Q03519 686 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 RAPSNQ13702 412 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 ZBED5Q49AG3 693 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 CPZQ66K79 652 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 Q6ZPB1 254 aaPredicted RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 GET4Q7L5D6 327 aaPredicted RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 C7orf61Q8IZ16 206 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 ZCCHC7Q8N3Z6 543 aaKnown RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 CHDHQ8NE62 594 aaPredicted RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 CHTF18Q8WVB6 975 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 FGF13Q92913 245 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 HSH2DQ96JZ2 352 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 TRIM39Q9HCM9 518 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 TMEM184CQ9NVA4 438 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 FZD4Q9ULV1 537 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 TMED5Q9Y3A6 229 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 KIF26AQ9ULI4 1882 aaPredicted RBP11.34□□□□□ -0.59
RHO-201ENST00000296271 KNL1Q8NG31 2342 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 KIAA1549LQ6ZVL6 1849 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 EVPLLA8MZ36 301 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 TMEM229AB2RXF0 380 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 H3BMQ9 156 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 EPN2O95208 641 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 FKBP9O95302 570 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 MAPK1P28482 360 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 KDELR2P33947 212 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 DAPP51397 102 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 TPD52P55327 224 aaPredicted RBP11.33□□□□□ -0.6
RHO-201ENST00000296271 HBA1P69905 142 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 CSTF3Q12996 717 aaKnown RBP11.33□□□□□ -0.6
RHO-201ENST00000296271 SMN1Q16637 294 aaKnown RBP11.33□□□□□ -0.6
RHO-201ENST00000296271 DPY19L1Q2PZI1 675 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 HNRNPA1L2Q32P51 320 aaKnown RBP11.33□□□□□ -0.6
RHO-201ENST00000296271 CPTPQ5TA50 214 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 XAF1Q6GPH4 301 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 FKBP9P1Q75LS8 142 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 GPR155Q7Z3F1 870 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 THAP5Q7Z6K1 395 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 C11orf96Q7Z7L8 435 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 FAM20CQ8IXL6 584 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 BPIFB6Q8NFQ5 453 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 SDCCAG3Q96C92 435 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 TIFAQ96CG3 184 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 COG8Q96MW5 612 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 ABCG4Q9H172 646 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 SERGEFQ9UGK8 458 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 RUVBL1Q9Y265 456 aaKnown RBP11.33□□□□□ -0.6
RHO-201ENST00000296271 TBC1D3BA6NDS4 549 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 PRR23AA6NEV1 266 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 H0YAE9 185 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 PAPLNO95428 1278 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 ZBTB11O95625 1053 aaPredicted RBP11.33□□□□□ -0.6
RHO-201ENST00000296271 SRPRAP08240 638 aaKnown RBP11.33□□□□□ -0.6
RHO-201ENST00000296271 C7P10643 843 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 ETFAP13804 333 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 CRHBPP24387 322 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 FMO3P31513 532 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 OR1E2P47887 323 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 CNTN1Q12860 1018 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 PPIGQ13427 754 aaKnown RBP eCLIP11.33□□□□□ -0.6
RHO-201ENST00000296271 TANGO2Q6ICL3 276 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 FBXO46Q6PJ61 603 aaPredicted RBP11.33□□□□□ -0.6
RHO-201ENST00000296271 COMMD6Q7Z4G1 85 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 C8orf59Q8N0T1 100 aaPredicted RBP11.33□□□□□ -0.6
RHO-201ENST00000296271 AADATQ8N5Z0 425 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 UCN3Q969E3 161 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 ARMC5Q96C12 935 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 CHFRQ96EP1 664 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 ZDHHC5Q9C0B5 715 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 LHPPQ9H008 270 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 RIBC2Q9H4K1 309 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 C5AR2Q9P296 337 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 DEC1Q9P2X7 70 aa11.33□□□□□ -0.6
RHO-201ENST00000296271 KCNE2Q9Y6J6 123 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms