RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 DESI2Q9BSY9 194 aa8.8□□□□□ -1
CNOT9-202ENST00000295701 RAB11FIP5Q9BXF6 653 aa8.8□□□□□ -1
CNOT9-202ENST00000295701 HES7Q9BYE0 225 aa8.8□□□□□ -1
CNOT9-202ENST00000295701 MRPS30Q9NP92 439 aaKnown RBP8.8□□□□□ -1
CNOT9-202ENST00000295701 GNPTGQ9UJJ9 305 aa8.8□□□□□ -1
CNOT9-202ENST00000295701 ITGB1BP2Q9UKP3 347 aa8.8□□□□□ -1
CNOT9-202ENST00000295701 CAPN6Q9Y6Q1 641 aa8.8□□□□□ -1
CNOT9-202ENST00000295701 LOC102723996A0A087X1L8 192 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 TCRBV7S3A2A0A539 114 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 MIF4GDA9UHW6 222 aaKnown RBP8.79□□□□□ -1
CNOT9-202ENST00000295701 C19orf84I3L1E1 186 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 HAT1O14929 419 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 RASAL1O95294 804 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 FKBP9O95302 570 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 MATN4O95460 622 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 UQCRHP07919 91 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 ERGP11308 486 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 RPS3P23396 243 aaKnown RBP eCLIP8.79□□□□□ -1
CNOT9-202ENST00000295701 CXCR2P25025 360 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 MGAT1P26572 445 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 CA7P43166 264 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 TTPAP49638 278 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 ZNF75DP51815 510 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 TERF1P54274 439 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 ADORA2A-AS1P86434 159 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 GBX1Q14549 363 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 KCNJ11Q14654 390 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 C3AR1Q16581 482 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 KLHL38Q2WGJ6 581 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 AARS2Q5JTZ9 985 aaKnown RBP8.79□□□□□ -1
CNOT9-202ENST00000295701 TMEM205Q6UW68 189 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 LANCL3Q6ZV70 420 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 NCCRP1Q6ZVX7 275 aaPredicted RBP8.79□□□□□ -1
CNOT9-202ENST00000295701 NEK10Q6ZWH5 1172 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 PRSS41Q7RTY9 318 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 SLC13A5Q86YT5 568 aaPredicted RBP8.79□□□□□ -1
CNOT9-202ENST00000295701 OTUD6BQ8N6M0 293 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 LURAP1Q96LR2 239 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 FOPNLQ96NB1 174 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 OR2A5Q96R48 311 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 PKP4Q99569 1192 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 MDFIQ99750 246 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 MACROD1Q9BQ69 325 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 ZNF700Q9H0M5 742 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 BRD7Q9NPI1 651 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 STMN3Q9NZ72 180 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 ABI3Q9P2A4 366 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 SEC14L3Q9UDX4 400 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 PCYOX1Q9UHG3 505 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 CRYL1Q9Y2S2 319 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 CCDC168Q8NDH2 2452 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 HIVEP1P15822 2718 aa8.79□□□□□ -1
CNOT9-202ENST00000295701 ANKRD17O75179 2603 aaKnown RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 A0A1W2PQ72 361 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 OR5H15A6NDH6 313 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 A8MUI8 341 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 ADARB2-AS1A8MUL3 147 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 PRAMEF2O60811 474 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 SEC24DO94855 1032 aaPredicted RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 VAPBO95292 243 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 IPO7O95373 1038 aaKnown RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 RPA3P35244 121 aaPredicted RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 CCNFP41002 786 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 PNLIPRP1P54315 467 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 KRTAP10-9P60411 292 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 ZNF33BQ06732 778 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 SIX1Q15475 284 aaPredicted RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 ZNF630Q2M218 657 aaPredicted RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 SKOR2Q2VWA4 1001 aaPredicted RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 ANKRD20A4Q4UJ75 823 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 ZNF425Q6IV72 752 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 BNC2Q6ZN30 1099 aaPredicted RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 CD163Q86VB7 1156 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 TMEM139Q8IV31 216 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 ZNF808Q8N4W9 903 aaPredicted RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 RAB42Q8N4Z0 105 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 OR9A4Q8NGU2 314 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 SMPDL3AQ92484 453 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 LPGAT1Q92604 370 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 CCDC138Q96M89 665 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 SIGLEC12Q96PQ1 595 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 NPAS2Q99743 824 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 TGIF2Q9GZN2 237 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 VN1R1Q9GZP7 353 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 MKKSQ9NPJ1 570 aaPredicted RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 RIC8BQ9NVN3 520 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 SYBUQ9NX95 663 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 ANKRD10Q9NXR5 420 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 SPATA7Q9P0W8 599 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 PAK5Q9P286 719 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 SUCOQ9UBS9 1254 aaKnown RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 TAC3Q9UHF0 121 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 TINAGQ9UJW2 476 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 CDC14AQ9UNH5 594 aa8.78□□□□□ -1
CNOT9-202ENST00000295701 KLF2Q9Y5W3 355 aaPredicted RBP8.78□□□□□ -1
CNOT9-202ENST00000295701 FAM227AF5H4B4 570 aa8.77□□□□□ -1.01
CNOT9-202ENST00000295701 H7BY64 318 aa8.77□□□□□ -1.01
CNOT9-202ENST00000295701 MYO1CO00159 1063 aa8.77□□□□□ -1.01
CNOT9-202ENST00000295701 KPNA5O15131 536 aa8.77□□□□□ -1.01
CNOT9-202ENST00000295701 VPS26AO75436 327 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms