RNA–Protein interactions for RNA: ENST00000290295.7

HOXB13-201, Transcript of homeobox B13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB13, Length 3,467 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB13-201ENST00000290295 PRKCDQ05655 676 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 GTF2H2Q13888 395 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 LRRC66Q68CR7 880 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 GTF2H2CQ6P1K8 395 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 GAREM2Q75VX8 874 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 NLGN4XQ8N0W4 816 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 ZBTB2Q8N680 514 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 GRPEL2Q8TAA5 225 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 PMEPA1Q969W9 287 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 ITPAQ9BY32 194 aa12.72□□□□□ -0.37
HOXB13-201ENST00000290295 SNTNA6NMZ2 147 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 GRM6O15303 877 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 LZTS3O60299 673 aaPredicted RBP12.71□□□□□ -0.37
HOXB13-201ENST00000290295 PRLP01236 227 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 MTHFD2P13995 350 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 SYN1P17600 705 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 ITPKAP23677 461 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 HMGCLP35914 325 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 CXCR4P61073 352 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 NTHL1P78549 312 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 SMN1Q16637 294 aaKnown RBP12.71□□□□□ -0.37
HOXB13-201ENST00000290295 TBRG1Q3YBR2 411 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 DPY19L3Q6ZPD9 716 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 SNX20Q7Z614 316 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 TCEAL8Q8IYN2 117 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 UBQLNLQ8IYU4 475 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 OR10A6Q8NH74 314 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 PIK3R3Q92569 461 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 KCNJ9Q92806 393 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 APOL4Q9BPW4 351 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 TM9SF3Q9HD45 589 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 FBXL12Q9NXK8 326 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 IL17CQ9P0M4 197 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 CLEC4EQ9ULY5 219 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 OR2A25A4D2G3 310 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 CDK2AP1O14519 115 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 AP3D1O14617 1153 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 SSX4O60224 188 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 CYP7B1O75881 506 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 WISP3O95389 354 aaPredicted RBP12.71□□□□□ -0.37
HOXB13-201ENST00000290295 ATF4P18848 351 aaPredicted RBP12.71□□□□□ -0.37
HOXB13-201ENST00000290295 PWP1Q13610 501 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 TYSND1Q2T9J0 566 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 SPANXN2Q5MJ10 180 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 LY6G5CQ5SRR4 150 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 AHSA2Q719I0 299 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 CCDC115Q96NT0 180 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 LINC00597Q9H2U6 94 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 MTG2Q9H4K7 406 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 PDFQ9HBH1 243 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 RAPGEFL1Q9UHV5 662 aa12.71□□□□□ -0.37
HOXB13-201ENST00000290295 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.71□□□□□ -0.37
HOXB13-201ENST00000290295 GRXCR2A6NFK2 248 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 TSC22D2O75157 780 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 ABLIM3O94929 683 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 LRATO95237 230 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 DGKQP52824 942 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 WDR5P61964 334 aaKnown RBP12.71□□□□□ -0.38
HOXB13-201ENST00000290295 NFATC2Q13469 925 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 LAIR1Q6GTX8 287 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 UBE2R2Q712K3 238 aaPredicted RBP12.71□□□□□ -0.38
HOXB13-201ENST00000290295 SYVN1Q86TM6 617 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 SDR16C5Q8N3Y7 309 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 TP53I13Q8NBR0 393 aaPredicted RBP12.71□□□□□ -0.38
HOXB13-201ENST00000290295 RHEBL1Q8TAI7 183 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 UBASH3BQ8TF42 649 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 SCAMP4Q969E2 229 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 VN1R3Q9BXE9 311 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 NUSAP1Q9BXS6 441 aaKnown RBP12.71□□□□□ -0.38
HOXB13-201ENST00000290295 C11orf49Q9H6J7 331 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 SLA2Q9H6Q3 261 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 SNX6Q9UNH7 406 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 A3GALT2U3KPV4 340 aa12.71□□□□□ -0.38
HOXB13-201ENST00000290295 FNDC1Q4ZHG4 1894 aaPredicted RBP12.7□□□□□ -0.38
HOXB13-201ENST00000290295 PNMA8CA0A1B0GUJ8 204 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 WDR47O94967 919 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 SEMA3DO95025 777 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 POP4O95707 220 aaKnown RBP12.7□□□□□ -0.38
HOXB13-201ENST00000290295 GPLD1P80108 840 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 C6orf136Q5SQH8 315 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 MBOAT1Q6ZNC8 495 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 TMEM159Q96B96 161 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 FOPNLQ96NB1 174 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 SLC46A2Q9BY10 475 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 TDP1Q9NUW8 608 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 RNF6Q9Y252 685 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 BPTFQ12830 3046 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 SDK1Q7Z5N4 2213 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 CXCR6O00574 342 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 RGS14O43566 566 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 SCO1O75880 301 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 TYRP14679 529 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 LIPAP38571 399 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 CTSKP43235 329 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 PPM1FP49593 454 aaPredicted RBP12.7□□□□□ -0.38
HOXB13-201ENST00000290295 ERAP2Q6P179 960 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 GRASPQ7Z6J2 395 aaPredicted RBP12.7□□□□□ -0.38
HOXB13-201ENST00000290295 OR4F6Q8NGB9 312 aa12.7□□□□□ -0.38
HOXB13-201ENST00000290295 OR8J3Q8NGG0 315 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms