RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 NRIP1P48552 1158 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 RPL6Q02878 288 aaKnown RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 KCNC3Q14003 757 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 DECR1Q16698 335 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 POMZP3Q6PJE2 187 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SHKBP1Q8TBC3 707 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ELP5Q8TE02 316 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 COPS5Q92905 334 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 AP1S3Q96PC3 154 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF700Q9H0M5 742 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 COPZ2Q9P299 210 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 CDC14AQ9UNH5 594 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 TRBC2A0A5B9 178 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ARL5CA6NH57 179 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 H7C2Y5 167 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 TSTQ16762 297 aaKnown RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SSX6Q7RTT6 188 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC38A3Q99624 504 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 OSBPL7Q9BZF2 842 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ARHGEF17Q96PE2 2063 aaPredicted RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 A0A1W2PP18 115 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 TTC34A8MYJ7 566 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 CLIC1O00299 241 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SCGB2A1O75556 95 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 IFNA2P01563 188 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 CDH11P55287 796 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLBPQ14493 270 aaKnown RBP eCLIP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF829Q3KNS6 432 aaPredicted RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 MINDY4Q4G0A6 757 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC22A15Q8IZD6 547 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 AQP11Q8NBQ7 271 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ZCCHC10Q8TBK6 192 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ACDQ96AP0 544 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ACTL8Q9H568 366 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 B8ZZF3 427 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 FKTNO75072 461 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ACTC1P68032 377 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ACTA1P68133 377 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 CCM2Q9BSQ5 444 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC7A8Q9UHI5 535 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 EVLQ9UI08 416 aaPredicted RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 RIMKLBQ9ULI2 386 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 MGAT4BQ9UQ53 548 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 HIF3AQ9Y2N7 669 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 OR6C70A6NIJ9 312 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 EOMESO95936 686 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ALAS2P22557 587 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC6A6P31641 620 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC9A3P48764 834 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 IRF9Q00978 393 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 PPIGQ13427 754 aaKnown RBP eCLIP7.76□□□□□ -1.174e-7■■□□□ 11.6
LIMD1-201ENST00000273317 GANABQ14697 944 aaKnown RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC29A4Q7RTT9 530 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 IQCHQ86VS3 1027 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 MAFIPQ8WZ33 124 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC38A8A6NNN8 435 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 M0R129 80 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 HLA-DQB2P05538 268 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 PIM1P11309 404 aaPredicted RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC18A2Q05940 514 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 GRK1Q15835 563 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 FUT10Q6P4F1 479 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF709Q8N972 641 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 OVCA2Q8WZ82 227 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 JSRP1Q96MG2 331 aaPredicted RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 HSPA12BQ96MM6 686 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 DGAT2Q96PD7 388 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 TRIB3Q96RU7 358 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 TMED9Q9BVK6 235 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SLC32A1Q9H598 525 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 AKTIPQ9H8T0 292 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 GNG8Q9UK08 70 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 KNTC1P50748 2209 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 SOX30O94993 753 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 GAD2Q05329 585 aa7.76□□□□□ -1.17
LIMD1-201ENST00000273317 MAGED1Q9Y5V3 778 aaPredicted RBP7.76□□□□□ -1.17
LIMD1-201ENST00000273317 EDDM13A0A1B0GTR0 161 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 IQCF5A8MTL0 148 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 GRID2O43424 1007 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 UNGP13051 313 aaPredicted RBP7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ZNF30P17039 623 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 DGKGP49619 791 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 LILRA4P59901 499 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 SP3Q02447 781 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 SNTA1Q13424 505 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 SCGB2B2Q4G0G5 96 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 CYBRD1Q53TN4 286 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 PLPP4Q5VZY2 271 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 BORAQ6PGQ7 559 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 GALNT12Q8IXK2 581 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 CAMKVQ8NCB2 501 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 PSD4Q8NDX1 1056 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 GPR152Q8TDT2 470 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TCEAL3Q969E4 200 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 IRF2BPLQ9H1B7 796 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 ANKRD36CQ5JPF3 1778 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TRIM64A6NGJ6 449 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 FAAHO00519 579 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 TPST2O60704 377 aa7.75□□□□□ -1.17
LIMD1-201ENST00000273317 MLLT3P42568 568 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms