RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 EMX2Q04743 252 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 MOGSQ13724 837 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 DGCR6Q14129 220 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 DUOXA1Q1HG43 343 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 TMEM35AQ53FP2 167 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 GIPC3Q8TF64 312 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 SPATA9Q9BWV2 254 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 KLF15Q9UIH9 416 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 CDH22Q9UJ99 828 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 TRIM43BA6NCK2 446 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 SMAD6O43541 496 aaKnown RBP13.48□□□□□ -0.25
CDH1-201ENST00000261769 MYL9P24844 172 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 SLC6A11P48066 632 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 CDH12P55289 794 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 PDZK1Q5T2W1 519 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 OR4F3Q6IEY1 312 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 ATCAYQ86WG3 371 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 ARL10Q8N8L6 244 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 RFKQ969G6 155 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
CDH1-201ENST00000261769 TAS2R9Q9NYW1 312 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 IL17CQ9P0M4 197 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 MYH7P12883 1935 aa13.48□□□□□ -0.25
CDH1-201ENST00000261769 PTPRZ1P23471 2315 aaPredicted RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 HCN1O60741 890 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 ENTPD5O75356 428 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 TRAPPC6AO75865 159 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 IGFBP5P24593 272 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 CCT3P49368 545 aaKnown RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 SLC14A2Q15849 920 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 PDCD4Q53EL6 469 aaKnown RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 YIPF4Q9BSR8 244 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 CXXC1Q9P0U4 656 aaPredicted RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 USP54Q70EL1 1684 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 TIPRLO75663 272 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 GADD45GO95257 159 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 ECDO95905 644 aaPredicted RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 EEFSECP57772 596 aaKnown RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 TRAF3Q13114 568 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 TRIM25Q14258 630 aaKnown RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 DGUOKQ16854 277 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 FAM182AQ5T1J6 154 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 ACVR1CQ8NER5 493 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 ZNF624Q9P2J8 865 aaPredicted RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 MYH8P13535 1937 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 KLF11O14901 512 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 MPZL2O60487 215 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 NUP62P37198 522 aaPredicted RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 CASP6P55212 293 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 TBPL1P62380 186 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 SPANXN2Q5MJ10 180 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 LCN1P1Q5VSP4 162 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 EGFLAMQ63HQ2 1017 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 HPS6Q86YV9 775 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 OR8H2Q8N162 312 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 LRRC46Q96FV0 321 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 DGCR6LQ9BY27 220 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 TMEM184CQ9NVA4 438 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 TOR4AQ9NXH8 423 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 CKLFQ9UBR5 152 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 FZD4Q9ULV1 537 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 PSAT1Q9Y617 370 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 MYH9P35579 1960 aaKnown RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 KRT36O76013 467 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 PRAMEF12O95522 483 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 CREB1P16220 341 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 KCNJ2P63252 427 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 SMAD4Q13485 552 aaKnown RBP13.47□□□□□ -0.25
CDH1-201ENST00000261769 ZNF678Q5SXM1 525 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 GAREM2Q75VX8 874 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 DDHD1Q8NEL9 900 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 OR5L2Q8NGL0 311 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 NUAK2Q9H093 628 aa13.47□□□□□ -0.25
CDH1-201ENST00000261769 E7ESA3 106 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 MSX2P35548 267 aaPredicted RBP13.46□□□□□ -0.25
CDH1-201ENST00000261769 XIAPP98170 497 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 TMEM44Q2T9K0 475 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 NDUFAF6Q330K2 333 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 FRMD7Q6ZUT3 714 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 ZDHHC21Q8IVQ6 265 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 OR52J3Q8NH60 311 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 RNASE11Q8TAA1 199 aaKnown RBP13.46□□□□□ -0.25
CDH1-201ENST00000261769 FAM81AQ8TBF8 368 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 FAM110BQ8TC76 370 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 RTP4Q96DX8 246 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 MARK1Q9P0L2 795 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 MAST2Q6P0Q8 1798 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 HMGB3O15347 200 aaKnown RBP13.46□□□□□ -0.25
CDH1-201ENST00000261769 RSL1D1O76021 490 aaKnown RBP13.46□□□□□ -0.25
CDH1-201ENST00000261769 ACADLP28330 430 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 PER3P56645 1201 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 MTPNP58546 118 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 ZNF252P-AS1Q0IIN9 211 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 NFE2L1Q14494 772 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 FIGLAQ6QHK4 219 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 PARS2Q7L3T8 475 aaKnown RBP13.46□□□□□ -0.25
CDH1-201ENST00000261769 EDAQ92838 391 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 CLPTM1LQ96KA5 538 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 B4GALT7Q9UBV7 327 aa13.46□□□□□ -0.25
CDH1-201ENST00000261769 THSD7AQ9UPZ6 1657 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms