RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HIST2H2AA3Q6FI13 130 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 FRMPD2BQ6IN97 320 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 KMT5CQ86Y97 462 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 CLYBLQ8N0X4 340 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 D2HGDHQ8N465 521 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 DNAJC22Q8N4W6 341 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 OR2A5Q96R48 311 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 ZFYVE21Q9BQ24 234 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 PITHD1Q9GZP4 211 aaPredicted RBP15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 CHRNA10Q9GZZ6 450 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 NT5DC2Q9H857 520 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 PDE7BQ9NP56 450 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 FARSBQ9NSD9 589 aaKnown RBP15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 PCDHGA4Q9Y5G9 962 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 PCDHGA11Q9Y5H2 935 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 DNAJC15Q9Y5T4 150 aa15.13■□□□□ 0.01
CCDC90B-201ENST00000260054 AGRPO00253 132 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 MANBAO00462 879 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 KITP10721 976 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 LSP1P33241 339 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 RPS15AP62244 130 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 FRG2Q64ET8 278 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 VN1R5Q7Z5H4 357 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 CRLF3Q8IUI8 442 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 RNF175Q8N4F7 328 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 MTFMTQ96DP5 389 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 FRG2BQ96QU4 278 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 HBEGFQ99075 208 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 ADAM21Q9UKJ8 722 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 SNX6Q9UNH7 406 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 LOC105369274A0A096LPK9 316 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 LOC102723532A0A0G2JNH3 316 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 HGSO14964 777 aaPredicted RBP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 KCNK5O95279 499 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 JUNP05412 331 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 CTSBP07858 339 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 VIMP08670 466 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 CDK4P11802 303 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 PCNAP12004 261 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 FOLR1P15328 257 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 ARL4DP49703 201 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 INHBCP55103 352 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 CYP4F2P78329 520 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 TRA2AQ13595 282 aaKnown RBP eCLIP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 C16orf72Q14CZ0 275 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 SGO1Q5FBB7 561 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 SCIMPQ6UWF3 145 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 VN1R4Q7Z5H5 301 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 LRRC34Q8IZ02 419 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 OR4N4Q8N0Y3 316 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 MFSD9Q8NBP5 474 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 HUS1BQ8NHY5 278 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 PIWIL2Q8TC59 973 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 USP7Q93009 1102 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 UBE2E3Q969T4 207 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 TMEM74Q96NL1 305 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 MTERF1Q99551 399 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 RHBGQ9H310 441 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 TUBB1Q9H4B7 451 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 ELOVL6Q9H5J4 265 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 FGFR1OP2Q9NVK5 253 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 ZFP69BQ9UJL9 534 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 APOBEC2Q9Y235 224 aaKnown RBP15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 PTGDR2Q9Y5Y4 395 aa15.12■□□□□ 0.01
CCDC90B-201ENST00000260054 MDC1Q14676 2089 aaKnown RBP15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 ADAMTS20P59510 1910 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 ULK1O75385 1050 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 MT-CO3P00414 261 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 PDYNP01213 254 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 KRT6AP02538 564 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 STATHP02808 62 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 KRT6BP04259 564 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 CCKBRP32239 447 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 AHRP35869 848 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 KRT6CP48668 564 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 SEC24CP53992 1094 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 IFT88Q13099 833 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 DDX39BQ13838 428 aaKnown RBP15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 ABRAXAS2Q15018 415 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 ZC3H12BQ5HYM0 836 aaKnown RBP15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 HES3Q5TGS1 186 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 MCATQ8IVS2 390 aaKnown RBP15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 TBC1D19Q8N5T2 526 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 ZNF473Q8WTR7 871 aaKnown RBP15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 TWIST2Q8WVJ9 160 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 SELENOMQ8WWX9 145 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 REPS1Q96D71 796 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 MACROD1Q9BQ69 325 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 TSC22D4Q9Y3Q8 395 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 AP1M2Q9Y6Q5 423 aa15.11■□□□□ 0.01
CCDC90B-201ENST00000260054 ANKDD1BA6NHY2 528 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 MAGEB17A8MXT2 336 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 H0YGG7 62 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 SKAP2O75563 359 aaPredicted RBP15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 TBX6O95947 436 aaPredicted RBP15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 ARF3P61204 181 aaPredicted RBP15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 GPR19Q15760 415 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 PDCD2Q16342 344 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms