RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 E7EQ34 232 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 ASNA1O43681 348 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 TPST2O60704 377 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 ETHE1O95571 254 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 MAGEA11P43364 429 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 RPS26P62854 115 aaKnown RBP12.79□□□□□ -0.36
PGBD1-201ENST00000259883 GAB1Q13480 694 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 ARMCX4Q5H9R4 360 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 PTOV1Q86YD1 416 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 APH1BQ8WW43 257 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 OR5M11Q96RB7 305 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 NDEL1Q9GZM8 345 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 RMI1Q9H9A7 625 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 TM9SF3Q9HD45 589 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 SPASTQ9UBP0 616 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 VWA8A3KMH1 1905 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 OR6C75A6NL08 312 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 PTPN6P29350 595 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 CTSKP43235 329 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 NKX3-2P78367 333 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 ST3GAL4Q11206 333 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 ACOX1Q15067 660 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 LEXMQ3ZCV2 418 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 CCBE1Q6UXH8 406 aaPredicted RBP12.79□□□□□ -0.36
PGBD1-201ENST00000259883 MEX3DQ86XN8 651 aaKnown RBP12.79□□□□□ -0.36
PGBD1-201ENST00000259883 RHOXF1Q8NHV9 184 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 UPF1Q92900 1129 aaKnown RBP eCLIP12.79□□□□□ -0.36
PGBD1-201ENST00000259883 FATE1Q969F0 183 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 CTPS2Q9NRF8 586 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 PCDHGA6Q9Y5G7 932 aa12.79□□□□□ -0.36
PGBD1-201ENST00000259883 TRBV5-3A0A0A0MS03 114 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 MGAT4DA6NG13 374 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 M0R082 166 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 WNT9AO14904 365 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 IGFBP1P08833 259 aaPredicted RBP12.78□□□□□ -0.36
PGBD1-201ENST00000259883 CD70P32970 193 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 PTGER1P34995 402 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 TGFBR2P37173 567 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 SPAM1P38567 509 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 EIF2DP41214 584 aaKnown RBP12.78□□□□□ -0.36
PGBD1-201ENST00000259883 BDKRB1P46663 353 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 GZMMP51124 257 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 CAP1Q01518 475 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 TRIM60Q495X7 471 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 SYT6Q5T7P8 510 aaPredicted RBP12.78□□□□□ -0.36
PGBD1-201ENST00000259883 ALG1LQ6GMV1 187 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 C17orf99Q6UX52 265 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 CERS6Q6ZMG9 384 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 TRIM46Q7Z4K8 759 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 NANOGNBQ7Z5D8 188 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 STARD8Q92502 1023 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 OTUB1Q96FW1 271 aaPredicted RBP12.78□□□□□ -0.36
PGBD1-201ENST00000259883 SPATA17Q96L03 361 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 ACAT2Q9BWD1 397 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 BTBD2Q9BX70 525 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 NECTIN3Q9NQS3 549 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 RAB23Q9ULC3 237 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 OR2A25A4D2G3 310 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 WWP2O00308 870 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 SYN3O14994 580 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 SEPT4O43236 478 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 ADAMTS4O75173 837 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 CCNKO75909 580 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 ANXA4P09525 319 aaPredicted RBP12.78□□□□□ -0.36
PGBD1-201ENST00000259883 PRIM2P49643 509 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 PPP5CP53041 499 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 TSTQ16762 297 aaKnown RBP12.78□□□□□ -0.36
PGBD1-201ENST00000259883 DUOXA1Q1HG43 343 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 DGKKQ5KSL6 1271 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 ZNF605Q86T29 641 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 CALHM3Q86XJ0 350 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 PARP16Q8N5Y8 322 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 OR4A15Q8NGL6 344 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 ZNF675Q8TD23 568 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 TMEM203Q969S6 136 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 CIDECQ96AQ7 238 aaPredicted RBP12.78□□□□□ -0.36
PGBD1-201ENST00000259883 CNPPD1Q9BV87 410 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 NUAK2Q9H093 628 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 MS4A12Q9NXJ0 267 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 RIMKLBQ9ULI2 386 aa12.78□□□□□ -0.36
PGBD1-201ENST00000259883 UPK1BO75841 260 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 AMD1P17707 334 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 MRPS15P82914 257 aaKnown RBP12.77□□□□□ -0.36
PGBD1-201ENST00000259883 B4GALNT1Q00973 533 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 EXOC3L2Q2M3D2 409 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 INO80DQ53TQ3 878 aaPredicted RBP12.77□□□□□ -0.36
PGBD1-201ENST00000259883 C1QTNF12Q5T7M4 302 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 AGAP7PQ5VUJ5 663 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 CMTM8Q8IZV2 173 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 MMP21Q8N119 569 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 LGI4Q8N135 537 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 OR10G2Q8NGC3 310 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 GGHQ92820 318 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 USP7Q93009 1102 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 SLC38A4Q969I6 547 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 SAMD11Q96NU1 681 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 PKP4Q99569 1192 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 DUSP26Q9BV47 211 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 TRPS1Q9UHF7 1281 aa12.77□□□□□ -0.36
PGBD1-201ENST00000259883 TTC36A6NLP5 189 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms