RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 TFEBP19484 476 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TFE3P19532 575 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 FASP25445 335 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 BDKRB1P46663 353 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SOX9P48436 509 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 GALK1P51570 392 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MAXP61244 160 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 HSD11B2P80365 405 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 DSG1Q02413 1049 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PCDH1Q08174 1060 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PPP3CAQ08209 521 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CHIT1Q13231 466 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SP140Q13342 867 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PDK3Q15120 406 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 DEFB133Q30KQ1 61 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 KIAA0930Q6ICG6 404 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 TBC1D21Q8IYX1 336 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 OFCC1Q8IZS5 231 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CNTD1Q8N815 330 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SCCPDHQ8NBX0 429 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 UXS1Q8NBZ7 420 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 KCT2Q8NC54 265 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 DENND6BQ8NEG7 585 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ITFG1Q8TB96 612 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 GPBAR1Q8TDU6 330 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SNRNP27Q8WVK2 155 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 SNRNP25Q9BV90 132 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 POMKQ9H5K3 350 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ALG9Q9H6U8 611 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 KCNJ16Q9NPI9 418 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 WASH6PQ9NQA3 447 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 HEBP1Q9NRV9 189 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SDHAF2Q9NX18 166 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SPHK1Q9NYA1 384 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MBD2Q9UBB5 411 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 RAB21Q9UL25 225 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PPT2Q9UMR5 302 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 NAALADL1Q9UQQ1 740 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PCDHGA5Q9Y5G8 931 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MRPL42Q9Y6G3 142 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 PHLPP1O60346 1717 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MEGF6O75095 1541 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 LOC102725191A0A1B0GVB3 256 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 FAM172BPA6NC97 362 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 D6RAR5 112 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 L7N2F9 121 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TOR1AO14656 332 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 FFAR3O14843 346 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MATN3O15232 486 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 GPR42O15529 346 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 B4GALT5O43286 388 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SCGNO76038 276 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 S1PR4O95977 384 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 RLN2P04090 185 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CHGBP05060 677 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 LRPAP1P30533 357 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 HOXA9P31269 272 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SERPINF1P36955 418 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 STK19P49842 368 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 NCBP2P52298 156 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNF38-201ENST00000259605 PKNOX1P55347 436 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 VAMP2P63027 116 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ARF5P84085 180 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ENPEPQ07075 957 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 HSPB3Q12988 150 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PMS2P3Q13401 168 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CCNIQ14094 377 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ABRAXAS2Q15018 415 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 RAB11BQ15907 218 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 EIF2S3LQ2VIR3 472 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 YOD1Q5VVQ6 348 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 SLX4IPQ5VYV7 408 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 FSTL4Q6MZW2 842 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 C11orf63Q6NUN7 778 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ULK3Q6PHR2 472 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CRTC1Q6UUV9 634 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 UGT2A3Q6UWM9 527 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ARCQ7LC44 396 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 POLNQ7Z5Q5 900 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 GPR149Q86SP6 731 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PM20D2Q8IYS1 436 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SLC39A11Q8N1S5 342 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 NUP37Q8NFH4 326 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 OR4K14Q8NGD5 310 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CORO2AQ92828 525 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TOP1MTQ969P6 601 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TRIM63Q969Q1 353 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TRAPPC9Q96Q05 1148 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ERGIC2Q96RQ1 377 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CDX2Q99626 313 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 CENPOQ9BU64 300 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 BHLHE41Q9C0J9 482 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 ARMCX1Q9P291 453 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ZNF346Q9UL40 294 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 TMEM5Q9Y2B1 443 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SLC9B1P1A6NJY1 282 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ANKRD30BLA7E2S9 258 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 C4orf47A7E2U8 309 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SOX1O00570 391 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 AP2A1O95782 977 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms