RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 OARD1Q9Y530 152 aa16.44■□□□□ 0.22
FOXA1-201ENST00000250448 ITGB6P18564 788 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 HNF1BP35680 557 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 GDF5P43026 501 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 DAPP51397 102 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 SNRPD1P62314 119 aaKnown RBP16.43■□□□□ 0.22
FOXA1-201ENST00000250448 CACNG1Q06432 222 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 GBX1Q14549 363 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 USP39Q53GS9 565 aaKnown RBP16.43■□□□□ 0.22
FOXA1-201ENST00000250448 PTRHD1Q6GMV3 140 aaKnown RBP16.43■□□□□ 0.22
FOXA1-201ENST00000250448 TRIM46Q7Z4K8 759 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 TMEM132CQ8N3T6 1108 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 NXPE3Q969Y0 559 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 TBC1D20Q96BZ9 403 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 FAM126AQ9BYI3 521 aaPredicted RBP16.43■□□□□ 0.22
FOXA1-201ENST00000250448 SLIRPQ9GZT3 109 aaKnown RBP16.43■□□□□ 0.22
FOXA1-201ENST00000250448 POLE4Q9NR33 117 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 ABCG2Q9UNQ0 655 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 MAN2B2Q9Y2E5 1009 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 MANBAO00462 879 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 SLC9A3R1O14745 358 aaPredicted RBP16.43■□□□□ 0.22
FOXA1-201ENST00000250448 WNT9AO14904 365 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 FAM20BO75063 409 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 PHC1P78364 1004 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 CATSPEREQ5SY80 951 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 ZNF540Q8NDQ6 660 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 APOL4Q9BPW4 351 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 PLA2G2FQ9BZM2 168 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 CCNB1IP1Q9NPC3 277 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 ACOT13Q9NPJ3 140 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 SERHLQ9NQF3 203 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 TRPS1Q9UHF7 1281 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 TSC22D4Q9Y3Q8 395 aa16.43■□□□□ 0.22
FOXA1-201ENST00000250448 ZNF682O95780 498 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 NTRK1P04629 796 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 GSNP06396 782 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 POU2F2P09086 479 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 BCKDHAP12694 445 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 CA5AP35218 305 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 ABHD18Q0P651 414 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 KDM4DQ6B0I6 523 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 OR2T5Q6IEZ7 315 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 SNX20Q7Z614 316 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 PLD3Q8IV08 490 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 OR2T29Q8NH02 315 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 OTUB2Q96DC9 234 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 DACH2Q96NX9 599 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 KXD1Q9BQD3 176 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 CD244Q9BZW8 370 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 DSN1Q9H410 356 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 NUP210Q8TEM1 1887 aaPredicted RBP16.42■□□□□ 0.22
FOXA1-201ENST00000250448 NPIPB15A6NHN6 443 aaPredicted RBP16.42■□□□□ 0.22
FOXA1-201ENST00000250448 PRRT4C9JH25 899 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 FCARP24071 287 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 SERPINA4P29622 427 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 RGS4P49798 205 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 SMN1Q16637 294 aaKnown RBP16.42■□□□□ 0.22
FOXA1-201ENST00000250448 FAM151BQ6UXP7 276 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 PAGE2Q7Z2X7 111 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 OR2A12Q8NGT7 310 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 LKAAEAR1Q8TD35 194 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 RPL3LQ92901 407 aaKnown RBP16.42■□□□□ 0.22
FOXA1-201ENST00000250448 MRGPRX3Q96LB0 322 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 MYADMQ96S97 322 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 INPP5KQ9BT40 448 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 RPP25Q9BUL9 199 aaKnown RBP16.42■□□□□ 0.22
FOXA1-201ENST00000250448 TM9SF3Q9HD45 589 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 MARK1Q9P0L2 795 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 ZNF229Q9UJW7 825 aa16.42■□□□□ 0.22
FOXA1-201ENST00000250448 SAMD4AQ9UPU9 718 aaKnown RBP16.42■□□□□ 0.22
FOXA1-201ENST00000250448 MYO1GB0I1T2 1018 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 TRBC1P01850 177 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 CISD3P0C7P0 127 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 HOXB9P17482 250 aaPredicted RBP16.41■□□□□ 0.22
FOXA1-201ENST00000250448 S100A3P33764 101 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 EIF2DP41214 584 aaKnown RBP16.41■□□□□ 0.22
FOXA1-201ENST00000250448 ARHGDIAP52565 204 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 PPP5CP53041 499 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 RPS14P62263 151 aaKnown RBP16.41■□□□□ 0.22
FOXA1-201ENST00000250448 MAD2L1BPQ15013 274 aaPredicted RBP16.41■□□□□ 0.22
FOXA1-201ENST00000250448 PHKG1Q16816 387 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 ANKRD54Q6NXT1 300 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 RFLNAQ6ZTI6 216 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 LGALS12Q96DT0 336 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 CLPBQ9H078 707 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 OSGIN1Q9UJX0 560 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 ATG2BQ96BY7 2078 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.41■□□□□ 0.22
FOXA1-201ENST00000250448 MRPS14O60783 128 aaKnown RBP16.41■□□□□ 0.22
FOXA1-201ENST00000250448 TGFBR2P37173 567 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 VITQ6UXI7 678 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 ANKRD46Q86W74 232 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 TTC29Q8NA56 475 aaPredicted RBP16.41■□□□□ 0.22
FOXA1-201ENST00000250448 RHOXF1Q8NHV9 184 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 UBTD2Q8WUN7 234 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 STARD8Q92502 1023 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 ULK4Q96C45 1275 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 SLC7A5P2Q9GIP4 190 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 ABCG8Q9H221 673 aa16.41■□□□□ 0.22
FOXA1-201ENST00000250448 ANKHQ9HCJ1 492 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms