RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 HNRNPCL3B7ZW38 293 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 TGDSO95455 350 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 PRLP01236 227 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 HNRNPCL4P0DMR1 293 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 HNF1BP35680 557 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 CCNFP41002 786 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 RIDAP52758 137 aaKnown RBP12.86□□□□□ -0.35
NEK9-201ENST00000238616 LACTB2Q53H82 288 aaPredicted RBP12.86□□□□□ -0.35
NEK9-201ENST00000238616 SCAMP5Q8TAC9 235 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 CD180Q99467 661 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 DUSP9Q99956 384 aaKnown RBP12.86□□□□□ -0.35
NEK9-201ENST00000238616 PLEKHA3Q9HB20 300 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 FKBPLQ9UIM3 349 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 TRAV6A0A075B6T7 132 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 OR6C70A6NIJ9 312 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 MRPL3P09001 348 aaKnown RBP12.86□□□□□ -0.35
NEK9-201ENST00000238616 ALPIP09923 528 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 VIPR1P32241 457 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 OTX2P32243 289 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 FASTKD3Q14CZ7 662 aaKnown RBP12.86□□□□□ -0.35
NEK9-201ENST00000238616 TAF1AQ15573 450 aaPredicted RBP12.86□□□□□ -0.35
NEK9-201ENST00000238616 SLC35F1Q5T1Q4 408 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 GRASPQ7Z6J2 395 aaPredicted RBP12.86□□□□□ -0.35
NEK9-201ENST00000238616 MFSD8Q8NHS3 518 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 AENQ8WTP8 325 aaKnown RBP12.86□□□□□ -0.35
NEK9-201ENST00000238616 PHB2Q99623 299 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 EPYCQ99645 322 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 ATG5Q9H1Y0 275 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 IRS2Q9Y4H2 1338 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 POP5Q969H6 163 aaKnown RBP12.86□□□□□ -0.35
NEK9-201ENST00000238616 TNFRSF10DQ9UBN6 386 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 A0A0U1RQJ8 604 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 SPARCP09486 303 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 AIF1P55008 147 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 CARD16Q5EG05 197 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 PAOXQ6QHF9 649 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 PHTF2Q8N3S3 785 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 BEX2Q9BXY8 128 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 ANKRA2Q9H9E1 313 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 BEX1Q9HBH7 125 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 AMBNQ9NP70 447 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 IFT172Q9UG01 1749 aa12.86□□□□□ -0.35
NEK9-201ENST00000238616 COQ9O75208 318 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 RAB36O95755 333 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 GTF2BQ00403 316 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 PRAMEF14Q5SWL7 426 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 PRAMEF13Q5VWM6 474 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 OR4C15Q8NGM1 316 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 PCDHB14Q9Y5E9 798 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 ARFGEF2Q9Y6D5 1785 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 FOXO6A8MYZ6 492 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 ZNF670-ZNF695F2Z2N8 137 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 ASLP04424 464 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 CTBP2P56545 445 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 SUSD1Q6UWL2 747 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 STRADAQ7RTN6 431 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 LRRTM4Q86VH4 590 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 FUKQ8N0W3 1084 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 SHKBP1Q8TBC3 707 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 FAM84AQ96KN4 292 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 KCTD7Q96MP8 289 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 DUSP26Q9BV47 211 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 NANSQ9NR45 359 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 RUVBL1Q9Y265 456 aaKnown RBP12.85□□□□□ -0.35
NEK9-201ENST00000238616 COL1A2P08123 1366 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 SMCHD1A6NHR9 2005 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 A0A1W2PRB8 838 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 SNX3O60493 162 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 AP2A1O95782 977 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 GRM5P41594 1212 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 CDH15P55291 814 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 ATXN7L3Q14CW9 347 aaPredicted RBP12.85□□□□□ -0.35
NEK9-201ENST00000238616 TAC3Q9UHF0 121 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 SLC22A14Q9Y267 594 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 A0A0U1RQK1 487 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 ANKRD34BA5PLL1 514 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 FSTL4Q6MZW2 842 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 LIX1LQ8IVB5 337 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 AQP11Q8NBQ7 271 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 KCNH6Q9H252 994 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 MAN2C1Q9NTJ4 1040 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 FZD4Q9ULV1 537 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 SLC7A11Q9UPY5 501 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 TCRBV5S4A2TA0A5A2 114 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 AUHQ13825 339 aaKnown RBP12.85□□□□□ -0.35
NEK9-201ENST00000238616 IL31RAQ8NI17 732 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 SPRYD4Q8WW59 207 aaPredicted RBP12.85□□□□□ -0.35
NEK9-201ENST00000238616 DLC1Q96QB1 1528 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 A0A1B0GVI7 797 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 H0YJX3 145 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 SLC30A8Q8IWU4 369 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 PDE10AQ9Y233 779 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 TBX18O95935 607 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 CNTD1Q8N815 330 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 JOSD2Q8TAC2 188 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 MSLNLQ96KJ4 702 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 TIMMDC1Q9NPL8 285 aa12.85□□□□□ -0.35
NEK9-201ENST00000238616 ZCCHC3Q9NUD5 404 aaKnown RBP12.85□□□□□ -0.35
NEK9-201ENST00000238616 OR2B6P58173 313 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms