RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 OCM2P0CE71 109 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 OCMP0CE72 109 aaPredicted RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 MPC1LP0DKB6 136 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 POU2F1P14859 743 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 POLR2EP19388 210 aaKnown RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 CD6P30203 668 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 RAE1P78406 368 aaKnown RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 SRSF11Q05519 484 aaKnown RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 TMEM115Q12893 351 aaPredicted RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 PLPP4Q5VZY2 271 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 METTL2BQ6P1Q9 378 aaKnown RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 SERPINA11Q86U17 422 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 SLCO6A1Q86UG4 719 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 CENPSQ8N2Z9 138 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 OR7G3Q8NG95 312 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 ZSWIM3Q96MP5 696 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 ACAT2Q9BWD1 397 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 OR51B5Q9H339 312 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 TM9SF3Q9HD45 589 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 M0R129 80 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 SLC16A6O15403 523 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 ETFAP13804 333 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 HOXA9P31269 272 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 RRM2P31350 389 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 DNAJA1P31689 397 aaKnown RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 VIPR1P32241 457 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 PTPN5P54829 565 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 AP1S2P56377 157 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 NCS1P62166 190 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 RPP38P78345 283 aaKnown RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 CREMQ03060 361 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 ZNF284Q2VY69 593 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 METTL3Q86U44 580 aaKnown RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 OR4A15Q8NGL6 344 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 CIDECQ96AQ7 238 aaPredicted RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 AP2M1Q96CW1 435 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 MAGED4Q96JG8 741 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 TRIT1Q9H3H1 467 aaKnown RBP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 SELENONQ9NZV5 590 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.11□□□□□ -0.15
CNOT3-201ENST00000221232 ERVW-1Q9UQF0 538 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 PCDHGA10Q9Y5H3 936 aa14.11□□□□□ -0.15
CNOT3-201ENST00000221232 K7ESM1 405 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 LCKP06239 509 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 FUT4P22083 530 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 IMPA1P29218 277 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 TRPC1P48995 793 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 ERVFC1P60507 584 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 TUBA3CQ13748 450 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 CTF1Q16619 201 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 SYT16Q17RD7 645 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 ZNF385BQ569K4 471 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 IGFN1Q86VF2 1251 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 CCDC71Q8IV32 467 aaPredicted RBP14.1□□□□□ -0.15
CNOT3-201ENST00000221232 OR52E4Q8NGH9 312 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 FAIMQ9NVQ4 179 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 SPASTQ9UBP0 616 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 RUVBL1Q9Y265 456 aaKnown RBP14.1□□□□□ -0.15
CNOT3-201ENST00000221232 AP3M1Q9Y2T2 418 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 PCDHB11Q9Y5F2 797 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 M0R3G1 203 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 LILRB3O75022 631 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 UGT2B11O75310 529 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 GPX2P18283 190 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 RYKP34925 604 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 IDUAP35475 653 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 MASP1P48740 699 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 CRYBA2P53672 197 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 MESP2Q0VG99 397 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 MTAPQ13126 283 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 TOP3AQ13472 1001 aaPredicted RBP14.1□□□□□ -0.15
CNOT3-201ENST00000221232 ADPRMQ3LIE5 342 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 PAGE2BQ5JRK9 111 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 LIPJQ5W064 366 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 KDM4DQ6B0I6 523 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 RNF165Q6ZSG1 346 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 ZNF554Q86TJ5 538 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 GALNT13Q8IUC8 556 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 MMP21Q8N119 569 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 DNAJB8Q8NHS0 232 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 YIPF2Q9BWQ6 316 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 SORBS1Q9BX66 1292 aaKnown RBP14.1□□□□□ -0.15
CNOT3-201ENST00000221232 GPN2Q9H9Y4 310 aaPredicted RBP14.1□□□□□ -0.15
CNOT3-201ENST00000221232 TRIM39Q9HCM9 518 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 SPHK2Q9NRA0 654 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 TDP1Q9NUW8 608 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 SCN3BQ9NY72 215 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 RPS6KA6Q9UK32 745 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 MAP4K5Q9Y4K4 846 aa14.1□□□□□ -0.15
CNOT3-201ENST00000221232 SLCO2B1O94956 709 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 FUCA1P04066 466 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 ELFN1P0C7U0 828 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 CCL5P13501 91 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 HLA-EP13747 358 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 MAGEA2P43356 314 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 NUDT6P53370 316 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 WDR5P61964 334 aaKnown RBP14.09□□□□□ -0.15
CNOT3-201ENST00000221232 MVKQ03426 396 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 EGFLAMQ63HQ2 1017 aa14.09□□□□□ -0.15
CNOT3-201ENST00000221232 DCDC5Q6ZRR9 648 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms