RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 OR9Q2Q8NGE9 314 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 TBC1D20Q96BZ9 403 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 OR5M11Q96RB7 305 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 HTATIP2Q9BUP3 242 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 TMEM121BQ9BXQ6 578 aaPredicted RBP13.55□□□□□ -0.24
USH1C-201ENST00000005226 SP140LQ9H930 580 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 CPNE5Q9HCH3 593 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ERVK13-1Q9NX77 482 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 KCTD5Q9NXV2 234 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ZNF226Q9NYT6 803 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 OR51B4Q9Y5P0 310 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 MICAL3Q7RTP6 2002 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 A8MV72 311 aaPredicted RBP13.55□□□□□ -0.24
USH1C-201ENST00000005226 SUV39H1O43463 412 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ASNA1O43681 348 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 NUAK1O60285 661 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 CYP7B1O75881 506 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ETHE1O95571 254 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 GBAP04062 536 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ZNF24P17028 368 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 SPAM1P38567 509 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 CASP3P42574 277 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 CDH12P55289 794 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 SMAD3P84022 425 aaKnown RBP13.55□□□□□ -0.24
USH1C-201ENST00000005226 ELP6Q0PNE2 266 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ST3GAL4Q11206 333 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 CDH18Q13634 790 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 HKDC1Q2TB90 917 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 COX20Q5RI15 118 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 TRAF7Q6Q0C0 670 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 LACC1Q8IV20 430 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 CYP4Z2PQ8N1L4 340 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 ELMOD1Q8N336 334 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 STX19Q8N4C7 294 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 LMNTD1Q8N9Z9 388 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 TXNDC15Q96J42 360 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 TTLL2Q9BWV7 592 aa13.55□□□□□ -0.24
USH1C-201ENST00000005226 GABRR3A8MPY1 467 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 CDK1P06493 297 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 HIST1H2AGP0C0S8 130 aaPredicted RBP13.54□□□□□ -0.24
USH1C-201ENST00000005226 ADORA3P0DMS8 318 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 HIST1H2ADP20671 130 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 PRPS1L1P21108 318 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 TRPC1P48995 793 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 FLT3LGP49771 235 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 COPZ1P61923 177 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 MTAPQ13126 283 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 ZNF181Q2M3W8 571 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 INO80DQ53TQ3 878 aaPredicted RBP13.54□□□□□ -0.24
USH1C-201ENST00000005226 CRTC1Q6UUV9 634 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 SYNPOQ8N3V7 929 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 GTPBP3Q969Y2 492 aaKnown RBP13.54□□□□□ -0.24
USH1C-201ENST00000005226 HIST1H2AHQ96KK5 128 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 HIST1H2AJQ99878 128 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 CLSTN3Q9BQT9 956 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 H2AFJQ9BTM1 129 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 KLF16Q9BXK1 252 aaPredicted RBP13.54□□□□□ -0.24
USH1C-201ENST00000005226 PRAMEF25A6NGN4 478 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 CLCA1A8K7I4 914 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 KMOO15229 486 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 SEPT4O43236 478 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 ELNP15502 786 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 S100A5P33763 92 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 GGT2P36268 569 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 UGT2B10P36537 528 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 ZNF157P51786 506 aaPredicted RBP13.54□□□□□ -0.24
USH1C-201ENST00000005226 IRF8Q02556 426 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 TAF12Q16514 161 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 CST9Q5W186 159 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 USP43Q70EL4 1123 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 TCAIMQ8N3R3 496 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 CHCHD4Q8N4Q1 142 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 SOCS4Q8WXH5 440 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 PLD4Q96BZ4 506 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 ALG14Q96F25 216 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 ASIC4Q96FT7 647 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 HHIPQ96QV1 700 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 TRPM5Q9NZQ8 1165 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 NDUFAF4Q9P032 175 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 RHCGQ9UBD6 479 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 SPASTQ9UBP0 616 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 OGDHLQ9ULD0 1010 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 LYVE1Q9Y5Y7 322 aa13.54□□□□□ -0.24
USH1C-201ENST00000005226 RPLP0P05388 317 aaKnown RBP13.53□□□□□ -0.24
USH1C-201ENST00000005226 HLA-EP13747 358 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 ETFAP13804 333 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 MAPK1P28482 360 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 CRATP43155 626 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 STK19P49842 368 aaPredicted RBP13.53□□□□□ -0.24
USH1C-201ENST00000005226 TUBA1BP68363 451 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 PPIGQ13427 754 aaKnown RBP eCLIP13.53□□□□□ -0.24
USH1C-201ENST00000005226 EXOC3L2Q2M3D2 409 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 XKR6Q5GH73 641 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 FAM26DQ5JW98 314 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 DGKKQ5KSL6 1271 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 RNF165Q6ZSG1 346 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 TPGS1Q6ZTW0 290 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 TUBA1AQ71U36 451 aa13.53□□□□□ -0.24
USH1C-201ENST00000005226 AMER2Q8N7J2 671 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms