RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 Gpr158Q8C419 1200 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Arl6ip5Q8R5J9 188 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gtf2e2Q9D902 292 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Herpud2Q9JJC9 404 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Hacl1Q9QXE0 581 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Mllt6B1AR10 1109 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Zfp738B8JJX8 793 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Spaca6E9Q8Q8 339 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Vmn2r111K7N674 857 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Tacr2P30549 384 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gdf6P43028 454 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Msi1Q61474 362 aaKnown RBP10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cst13Q80ZN5 141 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Kctd12bQ8C7J6 292 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cacnb2Q8CC27 655 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 March7Q9WV66 693 aa10.19□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm5788A0A1Y7VK80 144 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Aqp4P55088 323 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Rab2bP59279 216 aaKnown RBP10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Lingo2Q3URE9 606 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Smoc1Q8BLY1 463 aaKnown RBP10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ufsp2Q99K23 461 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Fam122aQ9DB52 284 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Btnl4A2CG29 586 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Zfp809G3X9G7 402 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 UbqlnlQ14DL0 610 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Slc10a7Q5PT53 340 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Rftn1Q6A0D4 554 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Pcdhga6Q91XY2 932 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 BvesQ9ES83 358 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 PpieQ9QZH3 301 aaKnown RBP10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cyp4a30bA0A087WS15 508 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Vmn2r90E9PXJ8 863 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cand1Q6ZQ38 1230 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Adgrg7Q8BM96 785 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Bend5Q8C6D4 421 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Aimp2Q8R010 320 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ncbp2Q9CQ49 156 aaKnown RBP10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Med27Q9DB40 311 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Kcnj9P48543 393 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Pdp1Q3UV70 538 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Sez6l2Q4V9Z5 910 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Neto2Q8BNJ6 525 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Zfp62Q8C827 914 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 DenrQ9CQJ6 198 aaKnown RBP10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Armc1Q9D7A8 282 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Eif3kQ9DBZ5 218 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Akap8lQ9R0L7 642 aaKnown RBP10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gsg1lD3Z7H4 322 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 NagluO88325 739 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Slc16a3P57787 470 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Timm13P62075 95 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Tmem121Q80XA0 318 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Fzd10Q8BKG4 582 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Mab21l2Q8BPP1 359 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Sgpl1Q8R0X7 568 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Olfr599Q8VG01 315 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 9230104L09RikQ9D264 133 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Hsd17b11Q9EQ06 298 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Zfp384E9Q1A5 584 aaKnown RBP10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Rpl10Q6ZWV3 214 aaKnown RBP10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cmtr2Q8BWQ4 767 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cd209eQ91ZW7 208 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Apbb2Q9DBR4 760 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm10037E9PX85 104 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm8159E9Q0R1 267 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ttf1Q62187 859 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 CochQ62507 552 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Svs1Q6WIZ7 820 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Trnp1Q80ZI1 223 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Zfp189Q8BKP2 608 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Casp9Q8C3Q9 454 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 MynnQ99MD8 610 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Fam136aQ9CR98 138 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Rcan2Q9JHG2 197 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cngb3Q9JJZ9 694 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Gm20441G3UYJ7 252 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Atp1b2P14231 290 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Alox12eP55249 662 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 TekQ02858 1122 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Akt2Q60823 481 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Zc3hc1Q80YV2 501 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 ToporsQ80Z37 1033 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Znf639Q99KZ6 485 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Nmnat1Q9EPA7 285 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Olfr1145A2AVC7 325 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ap2s1P62743 142 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Pyroxd2Q3U4I7 581 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Il18r1Q61098 537 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Tmem151bQ68FE7 561 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Garem2Q6PAJ3 880 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Cdh7Q8BM92 785 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Isoc1Q91V64 297 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Fam3aQ9D8T0 230 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Taf8Q9EQH4 308 aa10.18□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Marf1Q8BJ34 1730 aaKnown RBP10.17□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Ninj1O70131 152 aa10.17□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Hmgn1P18608 96 aaKnown RBP10.17□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Bod1Q5SQY2 173 aa10.17□□□□□ -0.78
Scn8a-201ENSMUST00000082209 Lrrtm4Q80XG9 590 aa10.17□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms