RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Hrh4Q91ZY2 391 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 4931417E11RikQ9CR05 305 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Tssk3Q9D2E1 268 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Efcab1Q9D3N2 212 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Idh3aQ9D6R2 366 aaKnown RBP8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Ca7Q9ERQ8 264 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Fbxl17Q9QZN1 701 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Scgb2b17S4R2V3 82 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rhox3fA2ANE1 215 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rhox3cA2AWM0 215 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Smok3aC0HKC8 504 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Smok3bC0HKC9 504 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rhox3hL7MU37 215 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gm5458L7N219 204 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hnrnph1O35737 449 aaKnown RBP8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Nudt10P0C027 164 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Nudt11P0C028 164 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Fads2p1Q0VAX3 487 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Glt6d1Q2NKH9 311 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Alg6Q3TAE8 507 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 CcnjQ3TZI6 379 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 A630001G21RikQ3UTB2 229 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Zfp868Q3UTQ6 422 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rhox3aQ4TU90 215 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Slc16a11Q5NC32 447 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 PkdccQ5RJI4 492 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Glt8d2Q640P4 349 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Zswim4Q8C7B8 1101 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Spdye4bQ8CDE8 236 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Zbtb6Q8K088 423 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Vmn1r19Q8R2C7 308 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Smg8Q8VE18 991 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 BollQ924M5 281 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Vmn1r52Q9EP79 309 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Frmpd4A2AFR3 1320 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Cped1B2RX70 1026 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gm10800D3Z496 220 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Npc1O35604 1277 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 OsmrO70458 971 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dnmt3bO88509 859 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dnmt3cP0DOY1 709 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gpr83P30731 423 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Map2k6P70236 334 aaKnown RBP8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Kbtbd8Q3UQV5 599 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Tfe3Q64092 572 aaKnown RBP8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Olfr823Q7TRH2 315 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Map6Q7TSJ2 906 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rasgef1bQ8JZL7 473 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Traf3ip2Q8N7N6 555 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Olfr824Q8VFU4 315 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Slc3a1Q91WV7 685 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dhrs7bQ99J47 323 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Snx20Q9D2Y5 313 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Slco2a1Q9EPT5 643 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 EcsitQ9QZH6 435 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Plek2Q9WV52 353 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 RfxankQ9Z205 269 aa8.71□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dapk1Q80YE7 1442 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Zfp985A2A7A5 519 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Fam46dB1ATX6 390 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Fam84bD3YXJ5 310 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 HgdO09173 445 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 MagP20917 626 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 PlgP20918 812 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Slc10a3P21129 473 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Hsd17b2P51658 381 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gjb2Q00977 226 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Prkaa1Q5EG47 559 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Cypt4Q6P925 153 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Olfr1065Q7TR70 313 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Olfr20Q7TRX9 314 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rtn4rl1Q8K0S5 445 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Slc35f6Q8VE96 372 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Abhd14aQ922Q6 247 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Krcc1Q99JT5 256 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Vta1Q9CR26 309 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 LhppQ9D7I5 270 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Uqcrc2Q9DB77 453 aaKnown RBP8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rb1cc1Q9ESK9 1588 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 1700014D04RikJ3QMS2 983 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Irs3O54718 495 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 ThpoP40226 356 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Npy2rP97295 381 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 AcadsQ07417 412 aaKnown RBP8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Bex6Q3TZW7 114 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Nr2e1Q64104 385 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Znf516Q7TSH3 1157 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 MtdhQ80WJ7 579 aaKnown RBP8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gpr150Q8BL07 427 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Fbxo43Q8CDI2 640 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Tmem17Q8K0U3 198 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dusp19Q8K4T5 220 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 RorbQ8R1B8 470 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Vmn1r203Q8R273 311 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Dyrk3Q922Y0 586 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rpusd4Q9CWX4 377 aaKnown RBP8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 TrilQ9DBY4 809 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Gadd45gQ9Z111 159 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Zfp395E9Q5N9 508 aa8.7□□□□□ -1.02
Clcn3-202ENSMUST00000056508 Rnf148G3X9R7 316 aa8.7□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms