RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 CTSFQ9UBX1 484 aa14.33□□□□□ -0.12
PHGDH-231ENST00000641939 NXT1Q9UKK6 140 aaKnown RBP14.33□□□□□ -0.12
PHGDH-231ENST00000641939 SH2B3Q9UQQ2 575 aa14.33□□□□□ -0.12
PHGDH-231ENST00000641939 TP53TG5Q9Y2B4 290 aa14.33□□□□□ -0.12
PHGDH-231ENST00000641939 MAU2Q9Y6X3 613 aa14.33□□□□□ -0.12
PHGDH-231ENST00000641939 RP1L1Q8IWN7 2480 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-231ENST00000641939 KCNE1BA0A087WTH5 132 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 CTAGE15A4D2H0 777 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 NPEPPSL1A6NEC2 478 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 PEX12O00623 359 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 P2RX6O15547 441 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 SUV39H1O43463 412 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 WISP3O95389 354 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-231ENST00000641939 CTAGE8P0CG41 777 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 CDH1P12830 882 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 SPRP35270 261 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-231ENST00000641939 CSNK1G2P78368 415 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 USP10Q14694 798 aaKnown RBP14.32□□□□□ -0.12
PHGDH-231ENST00000641939 GRTP1Q5TC63 336 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 ADAMTSL2Q86TH1 951 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 CTAGE6Q86UF2 777 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 CTAGE4Q8IX94 777 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 PPM1NQ8N819 430 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 NOA1Q8NC60 698 aaKnown RBP14.32□□□□□ -0.12
PHGDH-231ENST00000641939 FBF1Q8TES7 1133 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 TRIM44Q96DX7 344 aaPredicted RBP14.32□□□□□ -0.12
PHGDH-231ENST00000641939 THAP11Q96EK4 314 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 SPSB2Q99619 263 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 SLC25A23Q9BV35 468 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 CAB39LQ9H9S4 337 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 CTNNAL1Q9UBT7 734 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 CDC14AQ9UNH5 594 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 OARD1Q9Y530 152 aa14.32□□□□□ -0.12
PHGDH-231ENST00000641939 PCDHGA9Q9Y5G4 932 aaKnown RBP14.32□□□□□ -0.12
PHGDH-231ENST00000641939 VSTM2BA6NLU5 285 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 IGHEP01854 428 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 STMN1P16949 149 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 NR1D1P20393 614 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 FBLP22087 321 aaKnown RBP14.31□□□□□ -0.12
PHGDH-231ENST00000641939 MMP11P24347 488 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 GRK3P35626 688 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 CDKL1Q00532 357 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 OCA2Q04671 838 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 NAB1Q13506 487 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 TSNQ15631 228 aaKnown RBP14.31□□□□□ -0.12
PHGDH-231ENST00000641939 NDUFA9Q16795 377 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 ATG14Q6ZNE5 492 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 ASB18Q6ZVZ8 466 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 VN1R4Q7Z5H5 301 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 PPP1R32Q7Z5V6 425 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 TMEM151BQ8IW70 566 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 ARHGEF39Q8N4T4 335 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 ABHD11Q8NFV4 315 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 KIF18AQ8NI77 898 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 NACC2Q96BF6 587 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 FER1L6-AS2Q96M78 137 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 OR4K3Q96R72 315 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 FAM129AQ9BZQ8 928 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 DERL2Q9GZP9 239 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 SOX17Q9H6I2 414 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-231ENST00000641939 P4HTMQ9NXG6 502 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 ZNF282Q9UDV7 671 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-231ENST00000641939 DMGDHQ9UI17 866 aaKnown RBP14.31□□□□□ -0.12
PHGDH-231ENST00000641939 ANAPC2Q9UJX6 822 aa14.31□□□□□ -0.12
PHGDH-231ENST00000641939 FEZF1A0PJY2 475 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 J3QKU1 62 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 K7EM74 188 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 PRPF4O43172 522 aaKnown RBP eCLIP14.3□□□□□ -0.123e-6■■■■□ 19.9
PHGDH-231ENST00000641939 PHGDHO43175 533 aaKnown RBP14.3□□□□□ -0.12
PHGDH-231ENST00000641939 CEACAM4O75871 244 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 ANXA5P08758 320 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 CCDC166P0CW27 439 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 HNMTP50135 292 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 CCR8P51685 355 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 PGDP52209 483 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 DSG2Q14126 1118 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 FAM53BQ14153 422 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 ZKSCAN8Q15776 578 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-231ENST00000641939 GLE1Q53GS7 698 aaKnown RBP14.3□□□□□ -0.12
PHGDH-231ENST00000641939 SHISA6Q6ZSJ9 500 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 CEP128Q6ZU80 1094 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 FRA10AC1Q70Z53 315 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 CLEC1AQ8NC01 280 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 CAMKVQ8NCB2 501 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 OR4K1Q8NGD4 311 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 STT3BQ8TCJ2 826 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 MIEF2Q96C03 454 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 MMABQ96EY8 250 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-231ENST00000641939 EGFL8Q99944 293 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 DRC3Q9H069 523 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 MLXIPLQ9NP71 852 aa14.3□□□□□ -0.12
PHGDH-231ENST00000641939 MTRF1LQ9UGC7 380 aaKnown RBP14.3□□□□□ -0.12
PHGDH-231ENST00000641939 G3BP2Q9UN86 482 aaKnown RBP14.3□□□□□ -0.12
PHGDH-231ENST00000641939 PRRC2CQ9Y520 2896 aaKnown RBP14.3□□□□□ -0.12
PHGDH-231ENST00000641939 SCN2AQ99250 2005 aa14.29□□□□□ -0.12
PHGDH-231ENST00000641939 IGLV3-12A0A075B6K2 115 aa14.29□□□□□ -0.12
PHGDH-231ENST00000641939 A6NL46 340 aa14.29□□□□□ -0.12
PHGDH-231ENST00000641939 AGPSO00116 658 aa14.29□□□□□ -0.12
PHGDH-231ENST00000641939 FOXS1O43638 330 aa14.29□□□□□ -0.12
PHGDH-231ENST00000641939 FAM155BO75949 473 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms